Dataset Information

Quantitative PCR reveals strong spatial and temporal variation of the wasting disease pathogen, Labyrinthula zosterae in northern European eelgrass (Zostera marina) beds.

ABSTRACT: Seagrass beds are the foundation species of functionally important coastal ecosystems worldwide. The world's largest losses of the widespread seagrass Zostera marina (eelgrass) have been reported as a consequence of wasting disease, an infection with the endophytic protist Labyrinthula zosterae. During one of the most extended epidemics in the marine realm, ?90% of East and Western Atlantic eelgrass beds died-off between 1932 and 1934. Today, small outbreaks continue to be reported, but the current extent of L. zosterae in European meadows is completely unknown. In this study we quantify the abundance and prevalence of the wasting disease pathogen among 19 Z. marina populations in northern European coastal waters, using quantitative PCR (QPCR) with primers targeting a species specific portion of the internally transcribed spacer (ITS1) of L. zosterae. Spatially, we found marked variation among sites with abundances varying between 0 and 126 cells mg(-1) Z. marina dry weight (mean: 5.7 L. zosterae cells mg(-1) Z. marina dry weight ±1.9 SE) and prevalences ranged from 0-88.9%. Temporarily, abundances varied between 0 and 271 cells mg(-1) Z. marina dry weight (mean: 8.5±2.6 SE), while prevalences ranged from zero in winter and early spring to 96% in summer. Field concentrations accessed via bulk DNA extraction and subsequent QPCR correlated well with prevalence data estimated via isolation and cultivation from live plant tissue. L. zosterae was not only detectable in black lesions, a sign of Labyrinthula-induced necrosis, but also occurred in green, apparently healthy tissue. We conclude that L. zosterae infection is common (84% infected populations) in (northern) European eelgrass populations with highest abundances during the summer months. In the light of global climate change and increasing rate of marine diseases our data provide a baseline for further studies on the causes of pathogenic outbreaks of L. zosterae.

SUBMITTER: Bockelmann AC

PROVIDER: S-EPMC3642213 | biostudies-literature | 2013

REPOSITORIES: biostudies-literature

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Quantitative PCR reveals strong spatial and temporal variation of the wasting disease pathogen, Labyrinthula zosterae in northern European eelgrass (Zostera marina) beds.

Bockelmann Anna-Christina AC Tams Verena V Ploog Jana J Schubert Philipp R PR Reusch Thorsten B H TB

PloS one 20130502 5

Seagrass beds are the foundation species of functionally important coastal ecosystems worldwide. The world's largest losses of the widespread seagrass Zostera marina (eelgrass) have been reported as a consequence of wasting disease, an infection with the endophytic protist Labyrinthula zosterae. During one of the most extended epidemics in the marine realm, ∼90% of East and Western Atlantic eelgrass beds died-off between 1932 and 1934. Today, small outbreaks continue to be reported, but the curr ...[more]

PMID: 23658711

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Project description:Eelgrass (Zostera marina) forms extensive beds in coastal and estuarine environments and provides various ecosystem functions. The aboveground part of eelgrass provides habitats for other types of primary producers such as epiphytic microalgae and for epifaunal invertebrate grazers. Because of the different sizes, generation times and resource requirements, these different types of producers and consumers may be affected by different sets of biotic/abiotic factors over multiple spatial scales. We examined the spatial variations in three functional groups of eelgrass beds (eelgrass, epiphytic microalgae and epifaunal invertebrates) and the abiotic/biotic factors responsible for these variations in three lagoons with different environmental properties at the eastern region of Hokkaido Island, Japan. The spatial scale responsible for the variation in the biomasses of the three functional groups varied, where within-lagoon variation was important for eelgrass and epifauna but among-lagoon variation was important for microalgae. The environmental predictors for the observed spatial variations also differed among the different functional groups, with variation in eelgrass biomass related to depth, nutrient and salinity, epiphytes to water temperature, eelgrass biomass and water column chlorophyll and epifauna mainly to eelgrass biomass. These results revealed that the level of importance of among- and within-lagoon environmental gradients vary in the different functional groups of the eelgrass bed community. The large-scale variation in pelagic productivity, which is tightly related to the ocean current regimes, is likely responsible for the great among-lagoon variation in microalgae. The local variations in environmental factors such as salinity and nutrients, which change with alterations in terrestrial river inputs, are likely related to the great variations in eelgrass and epifauna within the ecosystem. The observed relationship of epifauna with eelgrass biomass indicates the importance of non-trophic plant-animal interactions because epifauna utilize eelgrass as habitat. We therefore emphasize the importance of evaluating spatial variations at multiple scales to further understand the functions of coastal and estuarine ecosystems.

Project description:Aquaporins (AQPs) are a class of integral membrane proteins involved in the transport of water and many other small solutes. The AQPs have been extensively studied in many land species obtaining water and nutrients from the soil, but their distribution and evolution have never been investigated in aquatic plant species, where solute assimilation is mostly through the leaves. In this regard, identification of AQPs in the genome of Zostera marina L. (eelgrass), an aquatic ecological model species could reveal important differences underlying solute uptake between land and aquatic species. In the present study, genome-wide analysis led to the identification of 25 AQPs belonging to four subfamilies, plasma membrane intrinsic proteins (PIPs), tonoplast intrinsic proteins (TIPs), nodulin 26-like intrinsic proteins (NIPs), small basic intrinsic proteins (SIPs) in eelgrass. As in other monocots, the XIP subfamily was found to be absent from the eelgrass genome. Further classification of subfamilies revealed a unique distribution pattern, namely the loss of the NIP2 (NIP-III) subgroup, which is known for silicon (Si) transport activity and ubiquitously present in monocot species. This finding has great importance, since the eelgrass population stability in natural niche is reported to be associated with Si concentrations in water. In addition, analysis of available RNA-seq data showed evidence of expression in 24 out of the 25 AQPs across four different tissues such as root, vegetative tissue, male flower and female flower. In contrast to land plants, higher expression of PIPs was observed in shoot compared to root tissues. This is likely explained by the unique plant architecture of eelgrass where most of the nutrients and water are absorbed by shoot rather than root tissues. Similarly, higher expression of the TIP1 and TIP5 families was observed specifically in male flowers suggesting a role in pollen maturation. This genome-wide analysis of AQP distribution, evolution and expression dynamics can find relevance in understanding the adaptation of aquatic and land species to their respective environments.

Dataset Information

Quantitative PCR reveals strong spatial and temporal variation of the wasting disease pathogen, Labyrinthula zosterae in northern European eelgrass (Zostera marina) beds.

Publications

Quantitative PCR reveals strong spatial and temporal variation of the wasting disease pathogen, Labyrinthula zosterae in northern European eelgrass (Zostera marina) beds.

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