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Gene regulatory networks governing pancreas development.

ABSTRACT: Elucidation of cellular and gene regulatory networks (GRNs) governing organ development will accelerate progress toward tissue replacement. Here, we have compiled reference GRNs underlying pancreas development from data mining that integrates multiple approaches, including mutant analysis, lineage tracing, cell purification, gene expression and enhancer analysis, and biochemical studies of gene regulation. Using established computational tools, we integrated and represented these networks in frameworks that should enhance understanding of the surging output of genomic-scale genetic and epigenetic studies of pancreas development and diseases such as diabetes and pancreatic cancer. We envision similar approaches would be useful for understanding the development of other organs.

SUBMITTER: Arda HE

PROVIDER: S-EPMC3645877 | biostudies-literature | 2013 Apr

REPOSITORIES: biostudies-literature

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Gene regulatory networks governing pancreas development.

Arda H Efsun HE Benitez Cecil M CM Kim Seung K SK

Developmental cell 20130401 1

Elucidation of cellular and gene regulatory networks (GRNs) governing organ development will accelerate progress toward tissue replacement. Here, we have compiled reference GRNs underlying pancreas development from data mining that integrates multiple approaches, including mutant analysis, lineage tracing, cell purification, gene expression and enhancer analysis, and biochemical studies of gene regulation. Using established computational tools, we integrated and represented these networks in fra ...[more]

PMID: 23597482

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