Dataset Information

Spectral Discrimination of the Invasive Plant Spartina alterniflora at Multiple Phenological Stages in a Saltmarsh Wetland.

ABSTRACT: Spartina alterniflora has widely invaded the saltmarshes of the Yangtze River Estuary and brought negative effects to the ecosystem. Remote sensing technique has recently been used to monitor its distribution, but the similar morphology and canopy structure among S. alterniflora and its neighbor species make it difficult even with high-resolution images. Nevertheless, these species have divergence on phenological stages throughout the year, which cause distinguishing spectral characteristics among them and provide opportunities for discrimination. The field spectra of the S. alterniflora community as well as its major victims, native Phragmites australis and Scirpus mariqueter, were measured in 2009 and 2010 at multi-phenological stages in the Yangtze River Estuary, aiming to find the most appropriate periods for mapping S. alterniflora. Collected spectral data were analyzed separately for every stage firstly by re-sampling reflectance curves into continued 5-nm-wide hyper-spectral bands and then by re-sampling into broad multi-spectral bands - the same as the band ranges of the TM sensor, as well as calculating commonly used vegetation indices. The results showed that differences among saltmarsh communities' spectral characteristics were affected by their phenological stages. The germination and early vegetative growth stage and the flowering stage were probably the best timings to identify S. alterniflora. Vegetation indices like NDVI, ANVI, VNVI, and RVI are likely to enhance spectral separability and also make it possible to discriminate S. alterniflora at its withering stage.

SUBMITTER: Ouyang ZT

PROVIDER: S-EPMC3695028 | biostudies-literature | 2013

REPOSITORIES: biostudies-literature

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Spectral Discrimination of the Invasive Plant Spartina alterniflora at Multiple Phenological Stages in a Saltmarsh Wetland.

Ouyang Zu-Tao ZT Gao Yu Y Xie Xiao X Guo Hai-Qiang HQ Zhang Ting-Ting TT Zhao Bin B

PloS one 20130627 6

Spartina alterniflora has widely invaded the saltmarshes of the Yangtze River Estuary and brought negative effects to the ecosystem. Remote sensing technique has recently been used to monitor its distribution, but the similar morphology and canopy structure among S. alterniflora and its neighbor species make it difficult even with high-resolution images. Nevertheless, these species have divergence on phenological stages throughout the year, which cause distinguishing spectral characteristics amo ...[more]

PMID: 23826265

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Project description:Hundreds of plants and half a kilogram of seeds of Spartina alterniflora, which were collected from Morehead City in North Carolina, Sapelo Island in Georgia, and Tampa Bay in Florida, were introduced to China in 1979. However, according to documented records, S. alterniflora from different origins were introduced to different areas when the species was first introduced to the coastal areas of China in the 1980s. In order to understand the relationship between the invasive S. alterniflora populations of China and the native S. alterniflora populations of the United States, and whether the genetic structure and genetic diversity of the invasive populations of China were affected by different introductions in the 1980s, molecular markers were used to determine the levels of gene flow and its effect on population differentiation. A total of 715 samples of S. alterniflora were collected from nine invasive populations in China and nine native populations from the United States. The genetic diversity and genetic structure of invasive and native populations were compared using microsatellite markers. The heterozygosity of Chinese invasive populations of S. alterniflora (HO = 0.538, HE = 0.725) were similar with those of native populations (HO = 0.530, HE = 0.744), which may attribute to its multiple introductions with the multisource populations from different geographic areas of the United States. However, the lower allelic diversities of Chinese invasive populations were detected, which may be due to the founder effect, or the bottleneck, which supports the theory that the allelic diversity is more sensitive to population bottlenecks than heterozygosity. The results of the STRUCTURE analysis among all sampling sites showed that the value of ?K was largest when K = 2, which indicated that the invasive S. alterniflora populations in China had completed differentiated from the native populations of the United States. This may be because of admixture and hybridization of three non-overlapping original populations, or the postintroduction rapid evolution in China, and reproductive isolation under long-term geographic isolation. There was significant differentiation among invasive populations, which was mainly affected by different human-mediated introductions in 1980s. Significant genetic structure (K = 7) and high genetic differentiation (Fst = 0.30193) were detected in Chinese invasive populations, which may due to the low natural gene flow among populations. The genetic structure of the invasive populations in China was still affected by the human-mediated introductions in the 1980s, and the different initial introductions might promote differentiation among the invasive populations. In fact, the human-mediated long-distance dispersal should take the most of responsibility for the rapid spread of S. alterniflora along the coast of China. Multisource introductions of S. alterniflora are perhaps helpful for local adaptation but itself cannot cause rapid spread along the whole coast of China. Meanwhile, we suggest that the prevention of gene exchange among populations of S. alterniflora is the first and most important step in the control of the species on the coast of China, because admixture and hybridization of isolated populations might generate new heterosis and increase the difficulty of managing S. alterniflora in China.

Project description:BackgroundSince Spartina alterniflora (simplified as Spartina) has strong ecological competitiveness and rapid growth, it has been introduced and living in the coastal wetland regions of China for more than 30 years. Taking coastal wetland in the Beibu Gulf of south China as an example, the effects of Spartina invasion on soil quality were investigated to provide scientific basis for soil management.MethodologyThe soil quality of six different coastal wetlands, i.e. mangrove (vegetation coverage is above 95%), mangrove- Spartina ecotones (vegetation coverage is above 95%), sparse mangrove (vegetation coverage is 10%-20%), sparse mangrove- Spartina ecotones (vegetation coverage is about 80%), Spartina (vegetation coverage is about 80%) and bare beach (no plants), were analyzed using the following indicators: pH, cation exchange capacity, contents of total nitrogen, total phosphorus and organic carbon, microbial biomass carbon, microbial biomass nitrogen, microbial carbon / organic carbon, and activities of urease, acid phosphatase, invertase, polyphenol oxidase and catalase.Principal findingsThe results showed that compared to mangrove wetland, most indicators in the mangrove-Spartina wetland showed a decline tendency except pH value, and the contents of total phosphorus and organic carbon, microbial biomass carbon and soil microbial biomass nitrogen, and the activities of acid phosphatase and invertase were significantly reduced (P<0.05). Compared to sparse mangrove wetland and bare beach, the Spartina invasion wetland (sparse mangrove-Spartina wetland and Spartina wetland) had higher contents of total nitrogen, total phosphorus and organic carbon, microbial biomass carbon, microbial biomass nitrogen, cation exchange capacity and the activities of urease and acid phosphatase, so soil quality in the sparse mangrove wetland and bare beach was significantly improved. Factor Analysis and PCA also showed that: the quality of mangrove wetland soil is better than that of mangrove-Spartina ecotones wetland soil; the quality of sparse mangrove-Spartina ecotones wetland soil is better than that of sparse mangrove wetland soil; the quality of Spartina wetland soil is better than that of bare beach wetland soil.Conclusions/significanceTherefore, in the invaded Beibu Gulf wetland ecosystems of south China, for the mangrove wetlands where the productivity of native plant was higher than that of Spartina, the Spartina invasion can cause soil degradation significantly and it must be strictly controlled, while for sparse mangrove wetland and bare beach where the productivity of native plant was lower than that of Spartina, Spartina invasion can improve the soil quality. Thus our study may help to better understand the effect of plant invasion.

Project description:Among invasive species, aquatic plants pose serious threats to local biodiversity and ecosystem functions. Spartina alterniflora Loisel. (Poaceae), native to the eastern United States, was introduced unintentionally into Japan (Aichi and Kumamoto Prefectures) at around 2010. This invasive species could easily and rapidly spread to estuarine areas of Japan via vigorous trade and transport, making the prediction of its future invasion necessary. Here, the distribution and structure of the genetic variation of S. alterniflora in Japan were examined using chloroplast DNA (cpDNA) and microsatellite genotyping analyses for clarifying its invasion route and process. According to the cpDNA analysis, S. alterniflora populations in Japan had a single haplotype (haplotype C4) that is the most dominant genotype around the Florida Peninsula, the region of its origin, and is also widely found in the introduced populations in the East Asia. Microsatellite analysis also showed a loss of genetic diversity in Japanese S. alterniflora populations (allelic richness (A R) = 1.20-1.39) compared with that in its native region (A R = 4.58-4.59), suggesting a founder effect on S. alterniflora that might have occurred after invasion of the species into Japan. The principal coordinate analysis and The STRUCTURE analysis indicated that no gene mixing among Japanese local populations (Aichi, northern and southern Kumamoto) was observed, indicating that Spartina invasion occurred independently into these regions. Among the three regions, trading between the ports of northern Kumamoto and the U.S. was obviously lower than trading with China. We concluded that invasive S. alterniflora might have independently invaded Japan at different times through an East Asia route, particularly via China (i.e., secondary introduction). Therefore, it is important to strengthen the quarantine control on the importation of commodities, especially of transport vehicles at potential donor spots (i.e., border control/border biosecurity system), and to share information networks on invasive species between each region/port for minimizing further risks of biological species such as Spartina.

Project description:Background and aimsEcosystem-based flood defence including salt-marsh as a key component is increasingly applied worldwide due to its multifunctionality and cost-effectiveness. While numerous experiments have explored the wave-attenuation effects of salt-marsh plants critical to flood protection, little is known about the physiological and biochemical responses of these species to continuous wave exposure.MethodsTo address this knowledge gap, we developed a shallow-water wave simulator to expose individual Spartina alterniflora plants to waves in a greenhouse for 8 weeks. S. alterniflora individuals were partially submerged and experienced horizontal sinusoidal motion to mimic plant exposure to shallow water waves. A factorial experiment was used to test the effects of three wave heights (4.1 cm, 5.5 cm and a no-wave control) and two wave periods (2 s and 3 s) on the following key physiological and biochemical plant parameters: plant growth, antioxidant defence and photosynthetic capacity.Key resultsComparison of wave treatment and control groups supported our hypotheses that wave exposure leads to oxidative stress in plants and suppresses plant photosynthetic capacity and thereby growth. In response, the wave-exposed plants exhibited activated antioxidant enzymes. Comparison between the different wave treatment groups suggested the wave effects to be generally correlated positively with wave height and negatively with wave period, i.e. waves with greater height and frequency imposed more stress on plants. In addition, wave-exposed plants tended to allocate more biomass to their roots. Such allocation is favourable because it enhances root anchorage against the wave impact.ConclusionsSimulated wave exposure systems such as the one used here are an effective tool for studying the response of salt-marsh plants to long-term wave exposure, and so help inform ecosystem-based flood defence projects in terms of plant selection, suitable transplantation locations and timing, etc. Given the projected variability of the global wave environment due to climate change, understanding plant response to long-term wave exposure has important implications for salt-marsh conservation and its central role in natural flood defence.

Dataset Information

Spectral Discrimination of the Invasive Plant Spartina alterniflora at Multiple Phenological Stages in a Saltmarsh Wetland.

Publications

Spectral Discrimination of the Invasive Plant Spartina alterniflora at Multiple Phenological Stages in a Saltmarsh Wetland.

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