Browse
Submit Data
Databases
API
Help

Dataset Information

18 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Genome Sequence of Bacillus subtilis SPZ1, an Evolved Strain for Higher Uptake Rate of Tributyrin.

ABSTRACT: The lipase-producing strain Bacillus subtilis SPZ1 is isolated from the medium by tributyrin as the sole carbon source. Here, we present a 4.13-Mb assembly of its genome sequence, which may provide various kinds of useful information related to Bacillus spp., such as mechanisms and control of the substrate uptake and protein secretion pathways.

SUBMITTER: Song P

PROVIDER: S-EPMC3735065 | biostudies-literature | 2013 Jul

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

Genome Sequence of Bacillus subtilis SPZ1, an Evolved Strain for Higher Uptake Rate of Tributyrin.

Song Ping P Xu Xian X Jiang Ling L Zhang Renchuang R Wang Jing J Xu Qing Q Li Shuang S

Genome announcements 20130725 4

The lipase-producing strain Bacillus subtilis SPZ1 is isolated from the medium by tributyrin as the sole carbon source. Here, we present a 4.13-Mb assembly of its genome sequence, which may provide various kinds of useful information related to Bacillus spp., such as mechanisms and control of the substrate uptake and protein secretion pathways. ...[more]

PMID: 23887917

Similar Datasets

Complete Genome Sequence of Bacillus subtilis subsp. subtilis Strain 3NA.

Project description:Bacillus subtilis 3NA reaches high cell densities during fed-batch fermentation and is an interesting target for further optimization as a production strain. Here, we announce the full genome of B. subtilis 3NA. The presence of specific Bacillus subtilis 168 and W23 genetic features suggests that 3NA is a hybrid of these strains.

| S-EPMC4357751 | biostudies-literature

Complete Genome Sequence of Bacillus subtilis subsp. subtilis Strain ∆6.

Project description:Bacillus subtilis ∆6 is a genome-reduced strain that was cured from six prophages and AT-rich islands. This strain is of great interest for biotechnological applications. Here, we announce the full-genome sequence of this strain. Interestingly, the conjugative element ICEBs1 has most likely undergone self-excision in B. subtilis ∆6.

| S-EPMC4966479 | biostudies-literature

Complete Genome Sequence of Bacillus subtilis Strain PY79.

Project description:Bacillus subtilis is a Gram-positive soil-dwelling and endospore-forming bacterium in the phylum Firmicutes. B. subtilis strain PY79 is a prototrophic laboratory strain that has been highly used for studying a wide variety of cellular pathways. Here, we announce the complete whole-genome sequence of B. subtilis PY79.

| S-EPMC3868870 | biostudies-literature

Complete Genome Sequence of the Prototrophic Bacillus subtilis subsp. subtilis Strain SP1.

Project description:Here, we present the complete genome sequence of the Bacillus subtilis strain SP1. This strain is a descendant of the laboratory strain 168. The strain is suitable for biotechnological applications because the prototrophy for tryptophan has been restored. Due to laboratory cultivation, the strain has acquired 24 additional sequence variations.

| S-EPMC7409865 | biostudies-literature

Draft Genome Sequence of the Type Strain Bacillus subtilis subsp. subtilis DSM10.

Project description:The Bacillus subtilis subsp. subtilis type strain DSM10 has been used as a reference in various studies. However, detailed information about the genome has not been available. Therefore, whole-genome sequencing was performed, and the sequence was compared with that of the related B. subtilis strain NCIB3610.

| S-EPMC7953295 | biostudies-literature

Complete Genome Sequence of Undomesticated Bacillus subtilis Strain NCIB 3610.

Project description:Bacillus subtilis is a Gram-positive bacterium that serves as an important experimental system. B. subtilis NCIB 3610 is an undomesticated strain that exhibits phenotypes lost from the more common domesticated laboratory strains. Here, we announce the complete genome sequence of DK1042, a genetically competent derivative of NCIB 3610.

| S-EPMC5477328 | biostudies-literature

Genome Sequence of the Bacillus subtilis Biofilm-Forming Transformable Strain PS216.

Project description:Bacillus subtilis PS216, a strain isolated in Slovenia, has been sequenced. PS216 is transformable and forms robust biofilms, making it useful for the study of competence regulation in an undomesticated bacterium.

| S-EPMC3707585 | biostudies-literature

Complete genome sequence of Bacillus subtilis strain QB928, a strain widely used in B. subtilis genetic studies.

Project description:The complete genome sequence of Bacillus subtilis strain QB928 was constructed to facilitate studies in the evolution of the genetic code. With a widespread use of the strain in Bacillus subtilis genetics studies, its complete genome sequence would facilitate deeper understanding of Bacillus subtilis genetics.

| S-EPMC3486399 | biostudies-literature

Genome Sequence of Bacillus subtilis subsp. subtilis Strain IITK SM1, Isolated from Kitchen Waste Compost.

Project description:We report here the complete genome sequence of Bacillus subtilis subsp. subtilis strain IITK SM1, isolated from kitchen waste compost. We have sequenced the whole genome of this strain to identify and characterize the enzymes that participate in efficient composting activity.

| S-EPMC6368648 | biostudies-literature

Complete Genome Sequence of Bacillus subtilis Strain WB800N, an Extracellular Protease-Deficient Derivative of Strain 168.

Project description:Bacillus subtilis WB800N is a genetically engineered variant of B. subtilis 168, such that all extracellular proteases are disrupted, which enables WB800N to be widely used for the expression of secretory proteins. Here, we report the 4.2-Mb complete genome sequence of WB800N and present all of the disrupted gene structure.

| S-EPMC6256541 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data