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Genome assembly of citrus leprosis virus nuclear type reveals a close association with orchid fleck virus.


ABSTRACT: The complete genome of citrus leprosis virus nuclear type (CiLV-N) was identified by small RNA sequencing utilizing leprosis-affected citrus samples collected from the state of Querétaro, Mexico. The nucleotide identity and phylogenetic analysis indicate that CiLV-N is very closely related to orchid fleck virus, which typically infects Cymbidium species.

SUBMITTER: Roy A 

PROVIDER: S-EPMC3735072 | biostudies-literature | 2013 Jul

REPOSITORIES: biostudies-literature

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Genome assembly of citrus leprosis virus nuclear type reveals a close association with orchid fleck virus.

Roy Avijit A   Stone Andrew A   Otero-Colina Gabriel G   Wei Gang G   Choudhary Nandlal N   Achor Diann D   Shao Jonathan J   Levy Laurene L   Nakhla Mark K MK   Hollingsworth Charla R CR   Hartung John S JS   Schneider William L WL   Brlansky Ronald H RH  

Genome announcements 20130725 4


The complete genome of citrus leprosis virus nuclear type (CiLV-N) was identified by small RNA sequencing utilizing leprosis-affected citrus samples collected from the state of Querétaro, Mexico. The nucleotide identity and phylogenetic analysis indicate that CiLV-N is very closely related to orchid fleck virus, which typically infects Cymbidium species. ...[more]

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