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Plate tectonics of virus shell assembly and reorganization in phage ?8, a distant relative of mammalian reoviruses.

ABSTRACT: The hallmark of a virus is its capsid, which harbors the viral genome and is formed from protein subunits, which assemble following precise geometric rules. dsRNA viruses use an unusual protein multiplicity (120 copies) to form their closed capsids. We have determined the atomic structure of the capsid protein (P1) from the dsRNA cystovirus ?8. In the crystal P1 forms pentamers, very similar in shape to facets of empty procapsids, suggesting an unexpected assembly pathway that proceeds via a pentameric intermediate. Unlike the elongated proteins used by dsRNA mammalian reoviruses, P1 has a compact trapezoid-like shape and a distinct arrangement in the shell, with two near-identical conformers in nonequivalent structural environments. Nevertheless, structural similarity with the analogous protein from the mammalian viruses suggests a common ancestor. The unusual shape of the molecule may facilitate dramatic capsid expansion during phage maturation, allowing P1 to switch interaction interfaces to provide capsid plasticity.

SUBMITTER: El Omari K

PROVIDER: S-EPMC3737474 | biostudies-literature | 2013 Aug

REPOSITORIES: biostudies-literature

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Plate tectonics of virus shell assembly and reorganization in phage φ8, a distant relative of mammalian reoviruses.

El Omari Kamel K Sutton Geoff G Ravantti Janne J JJ Zhang Hanwen H Walter Thomas S TS Grimes Jonathan M JM Bamford Dennis H DH Stuart David I DI Mancini Erika J EJ

Structure (London, England : 1993) 20130725 8

The hallmark of a virus is its capsid, which harbors the viral genome and is formed from protein subunits, which assemble following precise geometric rules. dsRNA viruses use an unusual protein multiplicity (120 copies) to form their closed capsids. We have determined the atomic structure of the capsid protein (P1) from the dsRNA cystovirus Φ8. In the crystal P1 forms pentamers, very similar in shape to facets of empty procapsids, suggesting an unexpected assembly pathway that proceeds via a pen ...[more]

PMID: 23891291

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Project description:The development of plate tectonics from a pre-plate tectonics regime requires both the initiation of subduction and the development of nascent subduction zones into long-lived contiguous features. Subduction itself has been shown to be sensitive to system parameters such as thermal state and the specific rheology. While generally it has been shown that cold-interior high-Rayleigh-number convection (such as on the Earth today) favours plates and subduction, due to the ability of the interior stresses to couple with the lid, a given system may or may not have plate tectonics depending on its initial conditions. This has led to the idea that there is a strong history dependence to tectonic evolution-and the details of tectonic transitions, including whether they even occur, may depend on the early history of a planet. However, intrinsic convective stresses are not the only dynamic drivers of early planetary evolution. Early planetary geological evolution is dominated by volcanic processes and impacting. These have rarely been considered in thermal evolution models. Recent models exploring the details of plate tectonic initiation have explored the effect of strong thermal plumes or large impacts on surface tectonism, and found that these 'primary drivers' can initiate subduction, and, in some cases, over-ride the initial state of the planet. The corollary of this, of course, is that, in the absence of such ongoing drivers, existing or incipient subduction systems under early Earth conditions might fail. The only detailed planetary record we have of this development comes from Earth, and is restricted by the limited geological record of its earliest history. Many recent estimates have suggested an origin of plate tectonics at approximately 3.0?Ga, inferring a monotonically increasing transition from pre-plates, through subduction initiation, to continuous subduction and a modern plate tectonic regime around that time. However, both numerical modelling and the geological record itself suggest a strong nonlinearity in the dynamics of the transition, and it has been noted that the early history of Archaean greenstone belts and trondhjemite-tonalite-granodiorite record many instances of failed subduction. Here, we explore the history of subduction failure on the early Earth, and couple these with insights from numerical models of the geodynamic regime at the time.This article is part of a discussion meeting issue 'Earth dynamics and the development of plate tectonics'.

Dataset Information

Plate tectonics of virus shell assembly and reorganization in phage ?8, a distant relative of mammalian reoviruses.

Publications

Plate tectonics of virus shell assembly and reorganization in phage φ8, a distant relative of mammalian reoviruses.

Similar Datasets

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