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Genome sequence of the moderately halophilic bacterium Salinicoccus carnicancri type strain Crm(T) (= DSM 23852(T)).


ABSTRACT: Salinicoccus carnicancri Jung et al. 2010 belongs to the genus Salinicoccus in the family Staphylococcaceae. Members of the Salinicoccus are moderately halophilic and originate from various salty environments. The halophilic features of the Salinicoccus suggest their possible uses in biotechnological applications, such as biodegradation and fermented food production. However, the genus Salinicoccus is poorly characterized at the genome level, despite its potential importance. This study presents the draft genome sequence of S. carnicancri strain Crm(T) and its annotation. The 2,673,309 base pair genome contained 2,700 protein-coding genes and 78 RNA genes with an average G+C content of 47.93 mol%. It was notable that the strain carried 72 predicted genes associated with osmoregulation, which suggests the presence of beneficial functions that facilitate growth in high-salt environments.

SUBMITTER: Hyun DW 

PROVIDER: S-EPMC3746416 | biostudies-literature | 2013

REPOSITORIES: biostudies-literature

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Genome sequence of the moderately halophilic bacterium Salinicoccus carnicancri type strain Crm(T) (= DSM 23852(T)).

Hyun Dong-Wook DW   Whon Tae Woong TW   Cho Yong-Joon YJ   Chun Jongsik J   Kim Min-Soo MS   Jung Mi-Ja MJ   Shin Na-Ri NR   Kim Joon-Yong JY   Kim Pil Soo PS   Yun Ji-Hyun JH   Lee Jina J   Oh Sei Joon SJ   Bae Jin-Woo JW  

Standards in genomic sciences 20130603 2


Salinicoccus carnicancri Jung et al. 2010 belongs to the genus Salinicoccus in the family Staphylococcaceae. Members of the Salinicoccus are moderately halophilic and originate from various salty environments. The halophilic features of the Salinicoccus suggest their possible uses in biotechnological applications, such as biodegradation and fermented food production. However, the genus Salinicoccus is poorly characterized at the genome level, despite its potential importance. This study presents  ...[more]

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