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Permanent draft genome sequence of Comamonas testosteroni KF-1.

ABSTRACT: Comamonas testosteroni KF-1 is a model organism for the elucidation of the novel biochemical degradation pathways for xenobiotic 4-sulfophenylcarboxylates (SPC) formed during biodegradation of synthetic 4-sulfophenylalkane surfactants (linear alkylbenzenesulfonates, LAS) by bacterial communities. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 6,026,527 bp long chromosome (one sequencing gap) exhibits an average G+C content of 61.79% and is predicted to encode 5,492 protein-coding genes and 114 RNA genes.

SUBMITTER: Weiss M

PROVIDER: S-EPMC3746432 | biostudies-literature | 2013

REPOSITORIES: biostudies-literature

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Permanent draft genome sequence of Comamonas testosteroni KF-1.

Weiss Michael M Kesberg Anna I AI Labutti Kurt M KM Pitluck Sam S Bruce David D Hauser Loren L Copeland Alex A Woyke Tanja T Lowry Stephen S Lucas Susan S Land Miriam M Goodwin Lynne L Kjelleberg Staffan S Cook Alasdair M AM Buhmann Matthias M Thomas Torsten T Schleheck David D

Standards in genomic sciences 20130530 2

Comamonas testosteroni KF-1 is a model organism for the elucidation of the novel biochemical degradation pathways for xenobiotic 4-sulfophenylcarboxylates (SPC) formed during biodegradation of synthetic 4-sulfophenylalkane surfactants (linear alkylbenzenesulfonates, LAS) by bacterial communities. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 6,026,527 bp long chromosome (one sequencing gap) exhibits an average G+C content of 61.79% ...[more]

PMID: 23991256

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