Transcriptome sequences resolve deep relationships of the grape family.
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ABSTRACT:
SUBMITTER: Wen J
PROVIDER: S-EPMC3775763 | biostudies-literature | 2013
REPOSITORIES: biostudies-literature
Publications
Transcriptome sequences resolve deep relationships of the grape family.
Wen Jun J Xiong Zhiqiang Z Nie Ze-Long ZL Mao Likai L Zhu Yabing Y Kan Xian-Zhao XZ Ickert-Bond Stefanie M SM Gerrath Jean J Zimmer Elizabeth A EA Fang Xiao-Dong XD
PloS one 20130917 9
Previous phylogenetic studies of the grape family (Vitaceae) yielded poorly resolved deep relationships, thus impeding our understanding of the evolution of the family. Next-generation sequencing now offers access to protein coding sequences very easily, quickly and cost-effectively. To improve upon earlier work, we extracted 417 orthologous single-copy nuclear genes from the transcriptomes of 15 species of the Vitaceae, covering its phylogenetic diversity. The resulting transcriptome phylogeny ...[more]
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