HTSstation: a web application and open-access libraries for high-throughput sequencing data analysis.
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ABSTRACT:
SUBMITTER: David FP
PROVIDER: S-EPMC3903476 | biostudies-literature | 2014
REPOSITORIES: biostudies-literature
Publications
HTSstation: a web application and open-access libraries for high-throughput sequencing data analysis.
David Fabrice P A FP Delafontaine Julien J Carat Solenne S Ross Frederick J FJ Lefebvre Gregory G Jarosz Yohan Y Sinclair Lucas L Noordermeer Daan D Rougemont Jacques J Leleu Marion M
PloS one 20140127 1
The HTSstation analysis portal is a suite of simple web forms coupled to modular analysis pipelines for various applications of High-Throughput Sequencing including ChIP-seq, RNA-seq, 4C-seq and re-sequencing. HTSstation offers biologists the possibility to rapidly investigate their HTS data using an intuitive web application with heuristically pre-defined parameters. A number of open-source software components have been implemented and can be used to build, configure and run HTS analysis pipeli ...[more]
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