Visualization of the phylogenetic content of five genomes using dekapentagonal maps.
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ABSTRACT:
SUBMITTER: Zhaxybayeva O
PROVIDER: S-EPMC395770 | biostudies-literature | 2004
REPOSITORIES: biostudies-literature
Publications
Visualization of the phylogenetic content of five genomes using dekapentagonal maps.
Zhaxybayeva Olga O Hamel Lutz L Raymond Jason J Gogarten J Peter JP
Genome biology 20040216 3
The methods presented here summarize phylogenetic relationships of genomes in visually appealing and informative figures. Dekapentagonal maps depict phylogenetic information for orthologous genes present in five genomes, and provide a pre-screen for putatively horizontally transferred genes. If the majority of individual gene phylogenies are unresolved, bipartition histograms provide a means of uncovering and analyzing the plurality consensus. Analyses of genomes representing five photosynthetic ...[more]
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