Unknown

Dataset Information

0

The NHGRI GWAS Catalog, a curated resource of SNP-trait associations.


ABSTRACT: The National Human Genome Research Institute (NHGRI) Catalog of Published Genome-Wide Association Studies (GWAS) Catalog provides a publicly available manually curated collection of published GWAS assaying at least 100,000 single-nucleotide polymorphisms (SNPs) and all SNP-trait associations with P <1 × 10(-5). The Catalog includes 1751 curated publications of 11 912 SNPs. In addition to the SNP-trait association data, the Catalog also publishes a quarterly diagram of all SNP-trait associations mapped to the SNPs' chromosomal locations. The Catalog can be accessed via a tabular web interface, via a dynamic visualization on the human karyotype, as a downloadable tab-delimited file and as an OWL knowledge base. This article presents a number of recent improvements to the Catalog, including novel ways for users to interact with the Catalog and changes to the curation infrastructure.

SUBMITTER: Welter D 

PROVIDER: S-EPMC3965119 | biostudies-literature | 2014 Jan

REPOSITORIES: biostudies-literature

altmetric image

Publications

The NHGRI GWAS Catalog, a curated resource of SNP-trait associations.

Welter Danielle D   MacArthur Jacqueline J   Morales Joannella J   Burdett Tony T   Hall Peggy P   Junkins Heather H   Klemm Alan A   Flicek Paul P   Manolio Teri T   Hindorff Lucia L   Parkinson Helen H  

Nucleic acids research 20131206 Database issue


The National Human Genome Research Institute (NHGRI) Catalog of Published Genome-Wide Association Studies (GWAS) Catalog provides a publicly available manually curated collection of published GWAS assaying at least 100,000 single-nucleotide polymorphisms (SNPs) and all SNP-trait associations with P <1 × 10(-5). The Catalog includes 1751 curated publications of 11 912 SNPs. In addition to the SNP-trait association data, the Catalog also publishes a quarterly diagram of all SNP-trait associations  ...[more]

Similar Datasets

| S-EPMC6323933 | biostudies-literature
| S-EPMC5815218 | biostudies-literature
| S-EPMC4896189 | biostudies-literature
| S-EPMC8763822 | biostudies-literature
| S-EPMC5728664 | biostudies-literature
| S-EPMC7731888 | biostudies-literature
| S-EPMC5573215 | biostudies-literature
| S-EPMC2691000 | biostudies-literature
| S-EPMC6360716 | biostudies-literature
| S-EPMC8059376 | biostudies-literature