Dataset Information

Population genetic structure of a sandstone specialist and a generalist heath species at two levels of sandstone patchiness across the Strait of Gibraltar.

ABSTRACT: Many habitat specialist species are originally composed of small, discontinuous populations because their habitats are naturally fragmented or patchy. They may have suffered the long-term effects of natural patchiness. Mediterranean heathlands, a representative habitat in the Strait of Gibraltar region, are associated with nutrient-poor, acidic sandstone soils. Sandstone soil patches in the African side of the Strait (Tangier) are, in general, smaller and more scattered than in the European side (Algeciras). In this study, we analyze the effect of this sandstone patchiness on the population genetic diversity and structure of two Erica species from these Mediterranean heathlands that differ in their edaphic specificity, E. australis, sandstone specialist, and E. arborea, generalist. Average levels of within-population genetic diversity and gene flow between populations were significantly lower in Tangier (high sandstone patchiness) than in Algeciras (low patchiness) for the sandstone specialist, whereas no differences between both sides of the Strait were detected in the edaphic generalist. Since most endemic species in Mediterranean heathlands of the Strait of Gibraltar are sandstone specialists, these results highlight an increased vulnerability to loss of genetic diversity and local extinction of the heathland endemic flora in the Tangier side of the Strait of Gibraltar.

SUBMITTER: Gil-Lopez MJ

PROVIDER: S-EPMC4039479 | biostudies-literature | 2014

REPOSITORIES: biostudies-literature

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Population genetic structure of a sandstone specialist and a generalist heath species at two levels of sandstone patchiness across the Strait of Gibraltar.

Gil-López Manuel Jesús MJ Segarra-Moragues José Gabriel JG Ojeda Fernando F

PloS one 20140530 5

Many habitat specialist species are originally composed of small, discontinuous populations because their habitats are naturally fragmented or patchy. They may have suffered the long-term effects of natural patchiness. Mediterranean heathlands, a representative habitat in the Strait of Gibraltar region, are associated with nutrient-poor, acidic sandstone soils. Sandstone soil patches in the African side of the Strait (Tangier) are, in general, smaller and more scattered than in the European side ...[more]

PMID: 24878545

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Project description:BackgroundThe Strait of Gibraltar is a crucial area in the settlement history of modern humans because it represents a possible connection between Africa and Europe. So far, genetic data were inconclusive about the fact that this strait constitutes a barrier to gene flow, as previous results were highly variable depending on the genetic locus studied. The present study evaluates the impact of the Gibraltar region in reducing gene flow between populations from North-Western Africa and South-Western Europe, by comparing formally various genetic loci. First, we compute several statistics of population differentiation. Then, we use an original simulation approach in order to infer the most probable evolutionary scenario for the settlement of the area, taking into account the effects of both demography and natural selection at some loci.ResultsWe show that the genetic patterns observed today in the region of the Strait of Gibraltar may reflect an ancient population genetic structure which has not been completely erased by more recent events such as Neolithic migrations. Moreover, the differences observed among the loci (i.e. a strong genetic boundary revealed by the Y-chromosome polymorphism and, at the other extreme, no genetic differentiation revealed by HLA-DRB1 variation) across the strait suggest specific evolutionary histories like sex-mediated migration and natural selection. By considering a model of balancing selection for HLA-DRB1, we here estimate a coefficient of selection of 2.2% for this locus (although weaker in Europe than in Africa), which is in line with what was estimated from synonymous versus non-synonymous substitution rates. Selection at this marker thus appears strong enough to leave a signature not only at the DNA level, but also at the population level where drift and migration processes were certainly relevant.ConclusionsOur multi-loci approach using both descriptive analyses and Bayesian inferences lead to better characterize the role of the Strait of Gibraltar in the evolution of modern humans. We show that gene flow across the Strait of Gibraltar occurred at relatively high rates since pre-Neolithic times and that natural selection and sex-bias migrations distorted the demographic signal at some specific loci of our genome.

Project description:Plant communities on tropical high islands, such as the Hawaiian Islands, are predicted to experience rapid climate change, resulting in novel climates. If increased temperature and/or drought exceed plant species' current tolerances, species that are unable to adapt or shift ranges risk extinction. By definition, habitat generalists have a wide niche breadth and thrive in a variety of habitats, whereas habitat specialists have a narrow niche breadth, and typically thrive under more specific climatic characteristics (e.g., cold). The objectives of this study were to: (1) classify plant species in the Hawaiian Islands along a habitat generalist-specialist continuum; (2) independently test the validity of species rankings, using environmental and biogeographic ranges; and (3) identify species' life-history traits that predict species location along the continuum. We quantified specialization for 170 plant species using species co-occurrence data from over one thousand plots to rank species' realized habitat niche breadth using the Jaccard index. The distribution of species along this continuum differed by species biogeographic origin, with endemic plant species ranked on the specialist end and non-native plant species ranked on the generalist end. Habitat specialization rankings also differed for four of nine tested variables (while controlling for biogeographic origin): number of habitat moisture types, minimum elevation, number of Hawaiian Islands, and life form. Life form was the only trait tested that differed across the continuum, with woody species ranked as stronger generalists than herbaceous species; this pattern was particularly evident for non-native species. This indirect method of estimating species' potential climatic flexibility uses increasingly available large plant community data sets with output rankings which represent species' realized habitat niches. Identifying species and plant communities that are on the habitat specialist end of the continuum allows for their prioritization in conservation planning, as globally the loss of specialists is an indication of degradation.

Dataset Information

Population genetic structure of a sandstone specialist and a generalist heath species at two levels of sandstone patchiness across the Strait of Gibraltar.

Publications

Population genetic structure of a sandstone specialist and a generalist heath species at two levels of sandstone patchiness across the Strait of Gibraltar.

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