Deducing fast electron density changes in randomly orientated uncrystallized biomolecules in a pump-probe experiment.

ABSTRACT: We propose a method for deducing time-resolved structural changes in uncrystallized biomolecules in solution. The method relies on measuring the angular correlations of the intensities, when averaged over a large number of diffraction patterns from randomly oriented biomolecules in solution in a liquid solvent. The experiment is somewhat like a pump-probe version of an experiment on small angle X-ray scattering, except that the data expected by the algorithm are not just the radial variation of the averaged intensities. The differences of these correlation functions as measured from a photoexcited and dark structure enable the direct calculation of the difference electron density with a knowledge of only the dark structure. We exploit a linear relation we derive between the difference in these correlation functions and the difference electron density, applicable for small structural changes.

SUBMITTER: Pande K 

PROVIDER: S-EPMC4052868 | biostudies-literature | 2014 Jul

REPOSITORIES: biostudies-literature