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InterMine: extensive web services for modern biology.


ABSTRACT: InterMine (www.intermine.org) is a biological data warehousing system providing extensive automatically generated and configurable RESTful web services that underpin the web interface and can be re-used in many other applications: to find and filter data; export it in a flexible and structured way; to upload, use, manipulate and analyze lists; to provide services for flexible retrieval of sequence segments, and for other statistical and analysis tools. Here we describe these features and discuss how they can be used separately or in combinations to support integrative and comparative analysis.

SUBMITTER: Kalderimis A 

PROVIDER: S-EPMC4086141 | biostudies-literature | 2014 Jul

REPOSITORIES: biostudies-literature

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InterMine: extensive web services for modern biology.

Kalderimis Alex A   Lyne Rachel R   Butano Daniela D   Contrino Sergio S   Lyne Mike M   Heimbach Joshua J   Hu Fengyuan F   Smith Richard R   Stěpán Radek R   Sullivan Julie J   Micklem Gos G  

Nucleic acids research 20140421 Web Server issue


InterMine (www.intermine.org) is a biological data warehousing system providing extensive automatically generated and configurable RESTful web services that underpin the web interface and can be re-used in many other applications: to find and filter data; export it in a flexible and structured way; to upload, use, manipulate and analyze lists; to provide services for flexible retrieval of sequence segments, and for other statistical and analysis tools. Here we describe these features and discuss  ...[more]

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