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Integrated metagenomics and metatranscriptomics analyses of root-associated soil from transgenic switchgrass.

ABSTRACT: The benefits of using transgenic switchgrass with decreased levels of caffeic acid 3-O-methyltransferase (COMT) as biomass feedstock have been clearly demonstrated. However, its effect on the soil microbial community has not been assessed. Here we report metagenomic and metatranscriptomic analyses of root-associated soil from COMT switchgrass compared with nontransgenic counterparts.

SUBMITTER: Chauhan A 

PROVIDER: S-EPMC4132618 | biostudies-literature | 2014 Aug

REPOSITORIES: biostudies-literature

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The benefits of using transgenic switchgrass with decreased levels of caffeic acid 3-O-methyltransferase (COMT) as biomass feedstock have been clearly demonstrated. However, its effect on the soil microbial community has not been assessed. Here we report metagenomic and metatranscriptomic analyses of root-associated soil from COMT switchgrass compared with nontransgenic counterparts. ...[more]

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