Unknown

Dataset Information

0

Electron tomography of cryo-immobilized plant tissue: a novel approach to studying 3D macromolecular architecture of mature plant cell walls in situ.


ABSTRACT: Cost-effective production of lignocellulosic biofuel requires efficient breakdown of cell walls present in plant biomass to retrieve the wall polysaccharides for fermentation. In-depth knowledge of plant cell wall composition is therefore essential for improving the fuel production process. The precise spatial three-dimensional (3D) organization of cellulose, hemicellulose, pectin and lignin within plant cell walls remains unclear to date since the microscopy techniques used so far have been limited to two-dimensional, topographic or low-resolution imaging, or required isolation or chemical extraction of the cell walls. In this paper we demonstrate that by cryo-immobilizing fresh tissue, then either cryo-sectioning or freeze-substituting and resin embedding, followed by cryo- or room temperature (RT) electron tomography, respectively, we can visualize previously unseen details of plant cell wall architecture in 3D, at macromolecular resolution (? 2 nm), and in near-native state. Qualitative and quantitative analyses showed that wall organization of cryo-immobilized samples were preserved remarkably better than conventionally prepared samples that suffer substantial extraction. Lignin-less primary cell walls were well preserved in both self-pressurized rapidly frozen (SPRF), cryo-sectioned samples as well as high-pressure frozen, freeze-substituted and resin embedded (HPF-FS-resin) samples. Lignin-rich secondary cell walls appeared featureless in HPF-FS-resin sections presumably due to poor stain penetration, but their macromolecular features could be visualized in unprecedented details in our cryo-sections. While cryo-tomography of vitreous tissue sections is currently proving to be instrumental in developing 3D models of lignin-rich secondary cell walls, here we confirm that the technically easier method of RT-tomography of HPF-FS-resin sections could be used immediately for routine study of low-lignin cell walls. As a proof of principle, we characterized the primary cell walls of a mutant (cob-6) and wild type Arabidopsis hypocotyl parenchyma cells by RT-tomography of HPF-FS-resin sections, and detected a small but significant difference in spatial organization of cellulose microfibrils in the mutant walls.

SUBMITTER: Sarkar P 

PROVIDER: S-EPMC4160213 | biostudies-literature | 2014

REPOSITORIES: biostudies-literature

altmetric image

Publications

Electron tomography of cryo-immobilized plant tissue: a novel approach to studying 3D macromolecular architecture of mature plant cell walls in situ.

Sarkar Purbasha P   Bosneaga Elena E   Yap Edgar G EG   Das Jyotirmoy J   Tsai Wen-Ting WT   Cabal Angelo A   Neuhaus Erica E   Maji Dolonchampa D   Kumar Shailabh S   Joo Michael M   Yakovlev Sergey S   Csencsits Roseann R   Yu Zeyun Z   Bajaj Chandrajit C   Downing Kenneth H KH   Auer Manfred M  

PloS one 20140910 9


Cost-effective production of lignocellulosic biofuel requires efficient breakdown of cell walls present in plant biomass to retrieve the wall polysaccharides for fermentation. In-depth knowledge of plant cell wall composition is therefore essential for improving the fuel production process. The precise spatial three-dimensional (3D) organization of cellulose, hemicellulose, pectin and lignin within plant cell walls remains unclear to date since the microscopy techniques used so far have been lim  ...[more]

Similar Datasets

| S-EPMC10023559 | biostudies-literature
| S-EPMC6911106 | biostudies-literature
| S-EPMC5215819 | biostudies-literature
| S-EPMC4643197 | biostudies-literature
| S-EPMC2519799 | biostudies-literature
| S-EPMC6384029 | biostudies-literature
| S-EPMC3662607 | biostudies-literature
| S-EPMC9881849 | biostudies-literature
| S-EPMC555690 | biostudies-literature
| S-EPMC7480112 | biostudies-literature