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GIANT: a cytoscape plugin for modular networks.


ABSTRACT: Network analysis provides deep insight into real complex systems. Revealing the link between topological and functional role of network elements can be crucial to understand the mechanisms underlying the system. Here we propose a Cytoscape plugin (GIANT) to perform network clustering and characterize nodes at the light of a modified Guimerà-Amaral cartography. This approach results into a vivid picture of the a topological/functional relationship at both local and global level. The plugin has been already approved and uploaded on the Cytoscape APP store.

SUBMITTER: Cumbo F 

PROVIDER: S-EPMC4183485 | biostudies-literature | 2014

REPOSITORIES: biostudies-literature

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GIANT: a cytoscape plugin for modular networks.

Cumbo Fabio F   Paci Paola P   Santoni Daniele D   Di Paola Luisa L   Giuliani Alessandro A  

PloS one 20141002 9


Network analysis provides deep insight into real complex systems. Revealing the link between topological and functional role of network elements can be crucial to understand the mechanisms underlying the system. Here we propose a Cytoscape plugin (GIANT) to perform network clustering and characterize nodes at the light of a modified Guimerà-Amaral cartography. This approach results into a vivid picture of the a topological/functional relationship at both local and global level. The plugin has be  ...[more]

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