Cassava genome from a wild ancestor to cultivated varieties.
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ABSTRACT:
SUBMITTER: Wang W
PROVIDER: S-EPMC4214410 | biostudies-literature | 2014 Oct
REPOSITORIES: biostudies-literature
Publications
Cassava genome from a wild ancestor to cultivated varieties.
Wang Wenquan W Feng Binxiao B Xiao Jingfa J Xia Zhiqiang Z Zhou Xincheng X Li Pinghua P Zhang Weixiong W Wang Ying Y Møller Birger Lindberg BL Zhang Peng P Luo Ming-Cheng MC Xiao Gong G Liu Jingxing J Yang Jun J Chen Songbi S Rabinowicz Pablo D PD Chen Xin X Zhang Hong-Bin HB Ceballos Henan H Lou Qunfeng Q Zou Meiling M Carvalho Luiz J C B LJ Zeng Changying C Xia Jing J Sun Shixiang S Fu Yuhua Y Wang Haiyan H Lu Cheng C Ruan Mengbin M Zhou Shuigeng S Wu Zhicheng Z Liu Hui H Kannangara Rubini Maya RM Jørgensen Kirsten K Neale Rebecca Louise RL Bonde Maya M Heinz Nanna N Zhu Wenli W Wang Shujuan S Zhang Yang Y Pan Kun K Wen Mingfu M Ma Ping-An PA Li Zhengxu Z Hu Meizhen M Liao Wenbin W Hu Wenbin W Zhang Shengkui S Pei Jinli J Guo Anping A Guo Jianchun J Zhang Jiaming J Zhang Zhengwen Z Ye Jianqiu J Ou Wenjun W Ma Yaqin Y Liu Xinyue X Tallon Luke J LJ Galens Kevin K Ott Sandra S Huang Jie J Xue Jingjing J An Feifei F Yao Qingqun Q Lu Xiaojing X Fregene Martin M López-Lavalle L Augusto Becerra LA Wu Jiajie J You Frank M FM Chen Meili M Hu Songnian S Wu Guojiang G Zhong Silin S Ling Peng P Chen Yeyuan Y Wang Qinghuang Q Liu Guodao G Liu Bin B Li Kaimian K Peng Ming M
Nature communications 20141010
Cassava is a major tropical food crop in the Euphorbiaceae family that has high carbohydrate production potential and adaptability to diverse environments. Here we present the draft genome sequences of a wild ancestor and a domesticated variety of cassava and comparative analyses with a partial inbred line. We identify 1,584 and 1,678 gene models specific to the wild and domesticated varieties, respectively, and discover high heterozygosity and millions of single-nucleotide variations. Our analy ...[more]
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