Dataset Information

Classification and visualization based on derived image features: application to genetic syndromes.

ABSTRACT: Data transformations prior to analysis may be beneficial in classification tasks. In this article we investigate a set of such transformations on 2D graph-data derived from facial images and their effect on classification accuracy in a high-dimensional setting. These transformations are low-variance in the sense that each involves only a fixed small number of input features. We show that classification accuracy can be improved when penalized regression techniques are employed, as compared to a principal component analysis (PCA) pre-processing step. In our data example classification accuracy improves from 47% to 62% when switching from PCA to penalized regression. A second goal is to visualize the resulting classifiers. We develop importance plots highlighting the influence of coordinates in the original 2D space. Features used for classification are mapped to coordinates in the original images and combined into an importance measure for each pixel. These plots assist in assessing plausibility of classifiers, interpretation of classifiers, and determination of the relative importance of different features.

SUBMITTER: Balliu B

PROVIDER: S-EPMC4236018 | biostudies-literature | 2014

REPOSITORIES: biostudies-literature

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Publications

Classification and visualization based on derived image features: application to genetic syndromes.

Balliu Brunilda B Würtz Rolf P RP Horsthemke Bernhard B Wieczorek Dagmar D Böhringer Stefan S

PloS one 20141118 11

Data transformations prior to analysis may be beneficial in classification tasks. In this article we investigate a set of such transformations on 2D graph-data derived from facial images and their effect on classification accuracy in a high-dimensional setting. These transformations are low-variance in the sense that each involves only a fixed small number of input features. We show that classification accuracy can be improved when penalized regression techniques are employed, as compared to a p ...[more]

PMID: 25405460

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Project description:Yield monitoring is an important parameter to evaluate cotton productivity during cotton harvest. Nondestructive and accurate yield monitoring is of great significance to cotton production. Unmanned aerial vehicle (UAV) remote sensing has fast and repetitive acquisition ability. The visible vegetation indices has the advantages of low cost, small amount of calculation and high resolution. The combination of the UAV and visible vegetation indices has been more and more applied to crop yield monitoring. However, there are some shortcomings in estimating cotton yield based on visible vegetation indices only as the similarity between cotton and mulch film makes it difficult to differentiate them and yields may be saturated based on vegetation index estimates near harvest. Texture feature is another important remote sensing information that can provide geometric information of ground objects and enlarge the spatial information identification based on original image brightness. In this study, RGB images of cotton canopy were acquired by UAV carrying RGB sensors before cotton harvest. The visible vegetation indices and texture features were extracted from RGB images for cotton yield monitoring. Feature parameters were selected in different methods after extracting the information. Linear and nonlinear methods were used to build cotton yield monitoring models based on visible vegetation indices, texture features and their combinations. The results show that (1) vegetation indices and texture features extracted from the ultra-high-resolution RGB images obtained by UAVs were significantly correlated with the cotton yield; (2) The best model was that combined with vegetation indices and texture characteristics RF_ELM model, verification set R 2 was 0.9109, and RMSE was 0.91277 t.ha-1. rRMSE was 29.34%. In conclusion, the research results prove that UAV carrying RGB sensor has a certain potential in cotton yield monitoring, which can provide theoretical basis and technical support for field cotton production evaluation.

Dataset Information

Classification and visualization based on derived image features: application to genetic syndromes.

Publications

Classification and visualization based on derived image features: application to genetic syndromes.

Similar Datasets

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