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The niche of an invasive marine microbe in a subtropical freshwater impoundment.

ABSTRACT: Growing attention in aquatic ecology is focusing on biogeographic patterns in microorganisms and whether these potential patterns can be explained within the framework of general ecology. The long-standing microbiologist's credo 'Everything is everywhere, but, the environment selects' suggests that dispersal is not limiting for microbes, but that the environment is the primary determining factor in microbial community composition. Advances in molecular techniques have provided new evidence that biogeographic patterns exist in microbes and that dispersal limitation may actually have an important role, yet more recent study using extremely deep sequencing predicts that indeed everything is everywhere. Using a long-term field study of the 'invasive' marine haptophyte Prymnesium parvum, we characterize the environmental niche of P. parvum in a subtropical impoundment in the southern United States. Our analysis contributes to a growing body of evidence that indicates a primary role for environmental conditions, but not dispersal, in the lake-wide abundances and seasonal bloom patterns in this globally important microbe.

SUBMITTER: Hambright KD

PROVIDER: S-EPMC4274415 | biostudies-literature | 2015 Jan

REPOSITORIES: biostudies-literature

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The niche of an invasive marine microbe in a subtropical freshwater impoundment.

Hambright K David KD Beyer Jessica E JE Easton James D JD Zamor Richard M RM Easton Anne C AC Hallidayschult Thayer C TC

The ISME journal 20140620 1

Growing attention in aquatic ecology is focusing on biogeographic patterns in microorganisms and whether these potential patterns can be explained within the framework of general ecology. The long-standing microbiologist's credo 'Everything is everywhere, but, the environment selects' suggests that dispersal is not limiting for microbes, but that the environment is the primary determining factor in microbial community composition. Advances in molecular techniques have provided new evidence that ...[more]

PMID: 24950108

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Project description:The transport of methane from sediments to the atmosphere by rising gas bubbles (ebullition) can be the dominant, yet highly variable emission pathway from shallow aquatic ecosystems. Ebullition fluxes have been reported to vary in space and time, as methane production, accumulation, and bubble release from the sediment matrix is affected by several physical and bio-geochemical processes acting at different timescales. Time-series analysis and empirical models have been used for investigating the temporal dynamics of ebullition and its controls. In this study, we analyzed the factors governing the temporal dynamics of ebullition and evaluated the application of empirical models to reproduce these dynamics across different timescales and across different aquatic systems. The analysis is based on continuous high frequency measurements of ebullition fluxes and environmental variables in a mesotrophic subtropical and polymictic freshwater reservoir. The synchronization of ebullition events across different monitoring sites, and the extent to which ebullition was correlated to environmental variables varied throughout the three years of observations and were affected by thermal stratification in the reservoir. Empirical models developed for other aquatic systems could reproduce a limited fraction of the variability in observed ebullition fluxes (R2 < 0.3), however the predictions could be improved by considering additional environmental variables. The model performance depended on the timescale. For daily and weekly time intervals, a generalized additive model could reproduce 70 and 96% of ebullition variability but could not resolve hourly flux variations (R2 = 0.19). Lastly, we discuss the potential application of empirical models for filling gaps in ebullition measurements and for reproducing the main temporal dynamics of the fluxes. The results provide crucial information for emission estimates, and for the development and implementation of strategies targeting at a reduction of methane emissions from inland waters.

Dataset Information

The niche of an invasive marine microbe in a subtropical freshwater impoundment.

Publications

The niche of an invasive marine microbe in a subtropical freshwater impoundment.

Similar Datasets

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