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Prediction of protein folding rates from the amino acid sequence-predicted secondary structure.

ABSTRACT: We present a method for predicting folding rates of proteins from their amino acid sequences only, or rather, from their chain lengths and their helicity predicted from their sequences. The method achieves 82% correlation with experiment over all 64 "two-state" and "multistate" proteins (including two artificial peptides) studied up to now.

SUBMITTER: Ivankov DN 

PROVIDER: S-EPMC428451 | biostudies-literature | 2004 Jun

REPOSITORIES: biostudies-literature

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Prediction of protein folding rates from the amino acid sequence-predicted secondary structure.

Ivankov Dmitry N DN   Finkelstein Alexei V AV  

Proceedings of the National Academy of Sciences of the United States of America 20040607 24

We present a method for predicting folding rates of proteins from their amino acid sequences only, or rather, from their chain lengths and their helicity predicted from their sequences. The method achieves 82% correlation with experiment over all 64 "two-state" and "multistate" proteins (including two artificial peptides) studied up to now. ...[more]

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