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Genome Annotation and Curation Using MAKER and MAKER-P.


ABSTRACT: This unit describes how to use the genome annotation and curation tools MAKER and MAKER-P to annotate protein-coding and noncoding RNA genes in newly assembled genomes, update/combine legacy annotations in light of new evidence, add quality metrics to annotations from other pipelines, and map existing annotations to a new assembly. MAKER and MAKER-P can rapidly annotate genomes of any size, and scale to match available computational resources.

SUBMITTER: Campbell MS 

PROVIDER: S-EPMC4286374 | biostudies-literature | 2014 Dec

REPOSITORIES: biostudies-literature

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Genome Annotation and Curation Using MAKER and MAKER-P.

Campbell Michael S MS   Holt Carson C   Moore Barry B   Yandell Mark M  

Current protocols in bioinformatics 20141212


This unit describes how to use the genome annotation and curation tools MAKER and MAKER-P to annotate protein-coding and noncoding RNA genes in newly assembled genomes, update/combine legacy annotations in light of new evidence, add quality metrics to annotations from other pipelines, and map existing annotations to a new assembly. MAKER and MAKER-P can rapidly annotate genomes of any size, and scale to match available computational resources. ...[more]

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