Dataset Information

Long-term impacts of disturbance on nitrogen-cycling bacteria in a New England salt marsh.

ABSTRACT: Recent studies on the impacts of disturbance on microbial communities indicate communities show differential responses to disturbance, yet our understanding of how different microbial communities may respond to and recover from disturbance is still rudimentary. We investigated impacts of tidal restriction followed by tidal restoration on abundance and diversity of denitrifying bacteria, ammonia-oxidizing bacteria (AOB), and ammonia-oxidizing archaea (AOA) in New England salt marshes by analyzing nirS and bacterial and archaeal amoA genes, respectively. TRFLP analysis of nirS and betaproteobacterial amoA genes revealed significant differences between restored and undisturbed marshes, with the greatest differences detected in deeper sediments. Additionally, community patterns indicated a potential recovery trajectory for denitrifiers. Analysis of archaeal amoA genes, however, revealed no differences in community composition between restored and undisturbed marshes, but we detected significantly higher gene abundance in deeper sediment at restored sites. Abundances of nirS and betaproteobacterial amoA genes were also significantly greater in deeper sediments at restored sites. Porewater ammonium was significantly higher at depth in restored sediments compared to undisturbed sediments, suggesting a possible mechanism driving some of the community differences. Our results suggest that impacts of disturbance on denitrifying and ammonia-oxidizing communities remain nearly 30 years after restoration, potentially impacting nitrogen-cycling processes in the marsh. We also present data suggesting that sampling deeper in sediments may be critical for detecting disturbance effects in coastal sediments.

SUBMITTER: Bernhard AE

PROVIDER: S-EPMC4316780 | biostudies-literature | 2015

REPOSITORIES: biostudies-literature

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Long-term impacts of disturbance on nitrogen-cycling bacteria in a New England salt marsh.

Bernhard Anne E AE Dwyer Courtney C Idrizi Adrian A Bender Geoffrey G Zwick Rachel R

Frontiers in microbiology 20150204

Recent studies on the impacts of disturbance on microbial communities indicate communities show differential responses to disturbance, yet our understanding of how different microbial communities may respond to and recover from disturbance is still rudimentary. We investigated impacts of tidal restriction followed by tidal restoration on abundance and diversity of denitrifying bacteria, ammonia-oxidizing bacteria (AOB), and ammonia-oxidizing archaea (AOA) in New England salt marshes by analyzing ...[more]

PMID: 25699033

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Project description:Background and aimsEcosystem-based flood defence including salt-marsh as a key component is increasingly applied worldwide due to its multifunctionality and cost-effectiveness. While numerous experiments have explored the wave-attenuation effects of salt-marsh plants critical to flood protection, little is known about the physiological and biochemical responses of these species to continuous wave exposure.MethodsTo address this knowledge gap, we developed a shallow-water wave simulator to expose individual Spartina alterniflora plants to waves in a greenhouse for 8 weeks. S. alterniflora individuals were partially submerged and experienced horizontal sinusoidal motion to mimic plant exposure to shallow water waves. A factorial experiment was used to test the effects of three wave heights (4.1 cm, 5.5 cm and a no-wave control) and two wave periods (2 s and 3 s) on the following key physiological and biochemical plant parameters: plant growth, antioxidant defence and photosynthetic capacity.Key resultsComparison of wave treatment and control groups supported our hypotheses that wave exposure leads to oxidative stress in plants and suppresses plant photosynthetic capacity and thereby growth. In response, the wave-exposed plants exhibited activated antioxidant enzymes. Comparison between the different wave treatment groups suggested the wave effects to be generally correlated positively with wave height and negatively with wave period, i.e. waves with greater height and frequency imposed more stress on plants. In addition, wave-exposed plants tended to allocate more biomass to their roots. Such allocation is favourable because it enhances root anchorage against the wave impact.ConclusionsSimulated wave exposure systems such as the one used here are an effective tool for studying the response of salt-marsh plants to long-term wave exposure, and so help inform ecosystem-based flood defence projects in terms of plant selection, suitable transplantation locations and timing, etc. Given the projected variability of the global wave environment due to climate change, understanding plant response to long-term wave exposure has important implications for salt-marsh conservation and its central role in natural flood defence.

Dataset Information

Long-term impacts of disturbance on nitrogen-cycling bacteria in a New England salt marsh.

Publications

Long-term impacts of disturbance on nitrogen-cycling bacteria in a New England salt marsh.

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