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Complete genome sequence of a novel genotype of squash mosaic virus infecting squash in Spain.

ABSTRACT: The complete genome sequence of a new isolate of squash mosaic virus (SqMV) infecting squash plants in Spain was obtained using deep sequencing of small RNAs. The low nucleotide sequence identities, with only 87 to 88% for RNA1 and 84 to 86% for RNA2 to known SqMV isolates, suggested that this isolate belongs to a novel genotype.

SUBMITTER: Li R

PROVIDER: S-EPMC4333673 | biostudies-literature | 2015 Feb

REPOSITORIES: biostudies-literature

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Complete genome sequence of a novel genotype of squash mosaic virus infecting squash in Spain.

Li Rugang R Gao Shan S Berendsen Sven S Fei Zhangjun Z Ling Kai-Shu KS

Genome announcements 20150212 1

The complete genome sequence of a new isolate of squash mosaic virus (SqMV) infecting squash plants in Spain was obtained using deep sequencing of small RNAs. The low nucleotide sequence identities, with only 87 to 88% for RNA1 and 84 to 86% for RNA2 to known SqMV isolates, suggested that this isolate belongs to a novel genotype. ...[more]

PMID: 25676773

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