Unknown

Dataset Information

0

MAP2K1 (MEK1) Mutations Define a Distinct Subset of Lung Adenocarcinoma Associated with Smoking.


ABSTRACT: PURPOSE:Genetic alterations affecting the MAPK/ERK pathway are common in lung adenocarcinoma (LAD). Early steps of the signaling pathway are most often affected with EGFR, KRAS, and BRAF mutations encompassing more than 70% of all alterations. Somatic mutations in MEK1, located downstream of BRAF, are rare and remain poorly defined as a distinct molecular subset. EXPERIMENTAL DESIGN:Tumors harboring MEK1 mutations were identified through targeted screening of a large LAD cohort concurrently interrogated for recurrent mutations in MEK1, EGFR, KRAS, BRAF, ERBB2/HER2, NRAS, PIK3CA, and AKT. Additional cases were identified through a search of publically available cancer genomic datasets. Mutations were correlated with patient characteristics and treatment outcomes. Overall survival was compared with stage-matched patients with KRAS- and EGFR-mutant LADs. RESULTS:We identified 36 MEK1-mutated cases among 6,024 LAD (0.6%; 95% confidence interval, 0.42-0.85). The majority of patients were smokers (97%, n = 35/36). There was no association with age, sex, race, or stage. The most common mutations were K57N (64%, 23/36) followed by Q56P (19%, 7/36), all mutually exclusive with other driver mutations in the targeted panel. Transversions G:C>T:A were predominant (89%, 31/35), in keeping with smoking-associated DNA damage. Additional less common somatic mutations were identified in the kinase domain, all of which are predicted to converge into a single interaction area based on in silico 3D modeling. CONCLUSIONS:MEK1 mutations define a distinct subset of lung cancers (?1%) with potential sensitivity to MEK inhibitors. Mutations are predominantly transversions, in keeping with a strong association with smoking.

SUBMITTER: Arcila ME 

PROVIDER: S-EPMC4401580 | biostudies-literature | 2015 Apr

REPOSITORIES: biostudies-literature

altmetric image

Publications

MAP2K1 (MEK1) Mutations Define a Distinct Subset of Lung Adenocarcinoma Associated with Smoking.

Arcila Maria E ME   Drilon Alexander A   Sylvester Brooke E BE   Lovly Christine M CM   Borsu Laetitia L   Reva Boris B   Kris Mark G MG   Solit David B DB   Ladanyi Marc M  

Clinical cancer research : an official journal of the American Association for Cancer Research 20141028 8


<h4>Purpose</h4>Genetic alterations affecting the MAPK/ERK pathway are common in lung adenocarcinoma (LAD). Early steps of the signaling pathway are most often affected with EGFR, KRAS, and BRAF mutations encompassing more than 70% of all alterations. Somatic mutations in MEK1, located downstream of BRAF, are rare and remain poorly defined as a distinct molecular subset.<h4>Experimental design</h4>Tumors harboring MEK1 mutations were identified through targeted screening of a large LAD cohort co  ...[more]

Similar Datasets

| S-EPMC5114141 | biostudies-literature
| S-EPMC7577747 | biostudies-literature
2016-08-21 | E-GEOD-85135 | biostudies-arrayexpress
2016-08-21 | E-GEOD-84263 | biostudies-arrayexpress
| S-EPMC6440215 | biostudies-literature
2016-08-21 | GSE85135 | GEO
2016-08-21 | E-GEOD-85133 | biostudies-arrayexpress
| S-EPMC8450540 | biostudies-literature
2016-08-21 | GSE84263 | GEO
| S-EPMC5339083 | biostudies-literature