Ontology highlight
ABSTRACT:
SUBMITTER: Poirot O
PROVIDER: S-EPMC441520 | biostudies-literature | 2004 Jul
REPOSITORIES: biostudies-literature
Poirot Olivier O Suhre Karsten K Abergel Chantal C O'Toole Eamonn E Notredame Cedric C
Nucleic acids research 20040701 Web Server issue
This paper presents 3DCoffee@igs, a web-based tool dedicated to the computation of high-quality multiple sequence alignments (MSAs). 3D-Coffee makes it possible to mix protein sequences and structures in order to increase the accuracy of the alignments. Structures can be either provided as PDB identifiers or directly uploaded into the server. Given a set of sequences and structures, pairs of structures are aligned with SAP while sequence-structure pairs are aligned with Fugue. The resulting coll ...[more]