CRISPR Diversity in E. coli Isolates from Australian Animals, Humans and Environmental Waters.
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ABSTRACT:
SUBMITTER: Sheludchenko MS
PROVIDER: S-EPMC4422515 | biostudies-literature | 2015
REPOSITORIES: biostudies-literature
Publications
CRISPR Diversity in E. coli Isolates from Australian Animals, Humans and Environmental Waters.
Sheludchenko Maxim S MS Huygens Flavia F Stratton Helen H Hargreaves Megan M
PloS one 20150506 5
Seventy four SNP genotypes and 54 E. coli genomes from kangaroo, Tasmanian devil, reptile, cattle, dog, horse, duck, bird, fish, rodent, human and environmental water sources were screened for the presence of the CRISPR 2.1 loci flanked by cas2 and iap genes. CRISPR 2.1 regions were found in 49% of the strains analysed. The majority of human E. coli isolates lacked the CRISPR 2.1 locus. We described 76 CRISPR 2.1 positive isolates originating from Australian animals and humans, which contained a ...[more]
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