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Detecting differential patterns of interaction in molecular pathways.


ABSTRACT: We consider statistical inference for potentially heterogeneous patterns of association characterizing the expression of bio-molecular pathways across different biologic conditions. We discuss a modeling approach based on Gaussian-directed acyclic graphs and provide computational and methodological details needed for posterior inference. Our application finds motivation in reverse phase protein array data from a study on acute myeloid leukemia, where interest centers on contrasting refractory versus relapsed patients. We illustrate the proposed method through both synthetic and case study data.

SUBMITTER: Yajima M 

PROVIDER: S-EPMC4441103 | biostudies-literature | 2015 Apr

REPOSITORIES: biostudies-literature

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Detecting differential patterns of interaction in molecular pathways.

Yajima Masanao M   Telesca Donatello D   Ji Yuan Y   Müller Peter P  

Biostatistics (Oxford, England) 20141216 2


We consider statistical inference for potentially heterogeneous patterns of association characterizing the expression of bio-molecular pathways across different biologic conditions. We discuss a modeling approach based on Gaussian-directed acyclic graphs and provide computational and methodological details needed for posterior inference. Our application finds motivation in reverse phase protein array data from a study on acute myeloid leukemia, where interest centers on contrasting refractory ve  ...[more]

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