Annotation of the Protein Coding Regions of the Equine Genome.
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ABSTRACT:
SUBMITTER: Hestand MS
PROVIDER: S-EPMC4481266 | biostudies-literature | 2015
REPOSITORIES: biostudies-literature
Publications
Annotation of the Protein Coding Regions of the Equine Genome.
Hestand Matthew S MS Kalbfleisch Theodore S TS Coleman Stephen J SJ Zeng Zheng Z Liu Jinze J Orlando Ludovic L MacLeod James N JN
PloS one 20150624 6
Current gene annotation of the horse genome is largely derived from in silico predictions and cross-species alignments. Only a small number of genes are annotated based on equine EST and mRNA sequences. To expand the number of equine genes annotated from equine experimental evidence, we sequenced mRNA from a pool of forty-three different tissues. From these, we derived the structures of 68,594 transcripts. In addition, we identified 301,829 positions with SNPs or small indels within these transc ...[more]
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