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The ReproGenomics Viewer: an integrative cross-species toolbox for the reproductive science community.

ABSTRACT: We report the development of the ReproGenomics Viewer (RGV), a multi- and cross-species working environment for the visualization, mining and comparison of published omics data sets for the reproductive science community. The system currently embeds 15 published data sets related to gametogenesis from nine model organisms. Data sets have been curated and conveniently organized into broad categories including biological topics, technologies, species and publications. RGV's modular design for both organisms and genomic tools enables users to upload and compare their data with that from the data sets embedded in the system in a cross-species manner. The RGV is freely available at http://rgv.genouest.org.

SUBMITTER: Darde TA

PROVIDER: S-EPMC4489245 | biostudies-literature | 2015 Jul

REPOSITORIES: biostudies-literature

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The ReproGenomics Viewer: an integrative cross-species toolbox for the reproductive science community.

Darde Thomas A TA Sallou Olivier O Becker Emmanuelle E Evrard Bertrand B Monjeaud Cyril C Le Bras Yvan Y Jégou Bernard B Collin Olivier O Rolland Antoine D AD Chalmel Frédéric F

Nucleic acids research 20150416 W1

We report the development of the ReproGenomics Viewer (RGV), a multi- and cross-species working environment for the visualization, mining and comparison of published omics data sets for the reproductive science community. The system currently embeds 15 published data sets related to gametogenesis from nine model organisms. Data sets have been curated and conveniently organized into broad categories including biological topics, technologies, species and publications. RGV's modular design for both ...[more]

PMID: 25883147

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