Dataset Information

Draft Whole-Genome Sequence of Serratia sp. Strain TEL, Associated with Oscheius sp. TEL-2014 (Nematoda: Rhabditidae) Isolated from a Grassland in South Africa.

ABSTRACT: Here, we report on the draft genome sequence of Serratia sp. strain TEL, associated with Oscheius sp. TEL-2014 (Nematoda: Rhabditidae, KM492926) isolated from a grassland in Suikerbosrand Nature Reserve near Johannesburg in South Africa. Serratia sp. strain TEL has a genome size of 5,000,541 bp with 4,647 genes and a G+C content of 59.1%.

SUBMITTER: Lephoto TE

PROVIDER: S-EPMC4498117 | biostudies-literature | 2015 Jul

REPOSITORIES: biostudies-literature

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Draft Whole-Genome Sequence of Serratia sp. Strain TEL, Associated with Oscheius sp. TEL-2014 (Nematoda: Rhabditidae) Isolated from a Grassland in South Africa.

Lephoto Tiisetso E TE Featherston Jonathan J Gray Vincent M VM

Genome announcements 20150709 4

Here, we report on the draft genome sequence of Serratia sp. strain TEL, associated with Oscheius sp. TEL-2014 (Nematoda: Rhabditidae, KM492926) isolated from a grassland in Suikerbosrand Nature Reserve near Johannesburg in South Africa. Serratia sp. strain TEL has a genome size of 5,000,541 bp with 4,647 genes and a G+C content of 59.1%. ...[more]

PMID: 26159531

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Project description:A new amphimictic species Oscheius indicus n. sp. is described and illustrated with morphological and molecular data. The species is characterized by a medium-sized and slender body (female: L = 1.1 to 1.5 mm; a = 16.8 to 20.6; b = 5.7 to 7.1; c = 7.5 to 10.4; c' = 5.0 to 7.6; V = 45 to 51%), presence of four incisures each in the lateral fields with three minute warts, long rectum (2 to 3 anal body diameters), nine pairs of papillae arranged as 1+1+1/3+3 pattern, a prominent double-flapped epipytigma on vulval opening, presence of open leptoderan bursa and crochet needle-shaped spicules place it in the insectivora group. Morphologically, O. indicus n. sp. closely resembles O. carolinensis, O. chongmingensis, O. colombiana, and O. nadarajani. Molecular phylogenetic analysis carried out using ITS and D2/D3 expansion region of 28S rDNA sequences suggests that O. indicus n. sp. is closer to O. chongmingensis and O. rugaonensis. In summary, the morphometrical data, morphological observations and molecular phylogenetic analysis suggested that O. indicus n. sp. is sufficiently different from any known species and is therefore proposed as a new species within the insectivora group.A new amphimictic species Oscheius indicus n. sp. is described and illustrated with morphological and molecular data. The species is characterized by a medium-sized and slender body (female: L = 1.1 to 1.5 mm; a = 16.8 to 20.6; b = 5.7 to 7.1; c = 7.5 to 10.4; c’ = 5.0 to 7.6; V = 45 to 51%), presence of four incisures each in the lateral fields with three minute warts, long rectum (2 to 3 anal body diameters), nine pairs of papillae arranged as 1+1+1/3+3 pattern, a prominent double-flapped epipytigma on vulval opening, presence of open leptoderan bursa and crochet needle-shaped spicules place it in the insectivora group. Morphologically, O. indicus n. sp. closely resembles O. carolinensis, O. chongmingensis, O. colombiana, and O. nadarajani. Molecular phylogenetic analysis carried out using ITS and D2/D3 expansion region of 28S rDNA sequences suggests that O. indicus n. sp. is closer to O. chongmingensis and O. rugaonensis. In summary, the morphometrical data, morphological observations and molecular phylogenetic analysis suggested that O. indicus n. sp. is sufficiently different from any known species and is therefore proposed as a new species within the insectivora group.

Dataset Information

Draft Whole-Genome Sequence of Serratia sp. Strain TEL, Associated with Oscheius sp. TEL-2014 (Nematoda: Rhabditidae) Isolated from a Grassland in South Africa.

Publications

Draft Whole-Genome Sequence of Serratia sp. Strain TEL, Associated with Oscheius sp. TEL-2014 (Nematoda: Rhabditidae) Isolated from a Grassland in South Africa.

Similar Datasets

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