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Creating a specialist protein resource network: a meeting report for the protein bioinformatics and community resources retreat.


ABSTRACT: During 11-12 August 2014, a Protein Bioinformatics and Community Resources Retreat was held at the Wellcome Trust Genome Campus in Hinxton, UK. This meeting brought together the principal investigators of several specialized protein resources (such as CAZy, TCDB and MEROPS) as well as those from protein databases from the large Bioinformatics centres (including UniProt and RefSeq). The retreat was divided into five sessions: (1) key challenges, (2) the databases represented, (3) best practices for maintenance and curation, (4) information flow to and from large data centers and (5) communication and funding. An important outcome of this meeting was the creation of a Specialist Protein Resource Network that we believe will improve coordination of the activities of its member resources. We invite further protein database resources to join the network and continue the dialogue.

SUBMITTER: Babbitt PC 

PROVIDER: S-EPMC4499208 | biostudies-literature | 2015

REPOSITORIES: biostudies-literature

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Creating a specialist protein resource network: a meeting report for the protein bioinformatics and community resources retreat.

Babbitt Patricia C PC   Bagos Pantelis G PG   Bairoch Amos A   Bateman Alex A   Chatonnet Arnaud A   Chen Mark Jinan MJ   Craik David J DJ   Finn Robert D RD   Gloriam David D   Haft Daniel H DH   Henrissat Bernard B   Holliday Gemma L GL   Isberg Vignir V   Kaas Quentin Q   Landsman David D   Lenfant Nicolas N   Manning Gerard G   Nagano Nozomi N   Srinivasan Narayanaswamy N   O'Donovan Claire C   Pruitt Kim D KD   Sowdhamini Ramanathan R   Rawlings Neil D ND   Saier Milton H MH   Sharman Joanna L JL   Spedding Michael M   Tsirigos Konstantinos D KD   Vastermark Ake A   Vriend Gerrit G  

Database : the journal of biological databases and curation 20150711


During 11-12 August 2014, a Protein Bioinformatics and Community Resources Retreat was held at the Wellcome Trust Genome Campus in Hinxton, UK. This meeting brought together the principal investigators of several specialized protein resources (such as CAZy, TCDB and MEROPS) as well as those from protein databases from the large Bioinformatics centres (including UniProt and RefSeq). The retreat was divided into five sessions: (1) key challenges, (2) the databases represented, (3) best practices f  ...[more]

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