Catalytic roles of ?Lys87 in tryptophan synthase: (15)N solid state NMR studies.

ABSTRACT: The proposed mechanism for tryptophan synthase shows ?Lys87 playing multiple catalytic roles: it bonds to the PLP cofactor, activates C4' for nucleophilic attack via a protonated Schiff base nitrogen, and abstracts and returns protons to PLP-bound substrates (i.e. acid-base catalysis). ?-¹?N-lysine TS was prepared to access the protonation state of ?Lys87 using ¹?N solid-state nuclear magnetic resonance (SSNMR) spectroscopy for three quasi-stable intermediates along the reaction pathway. These experiments establish that the protonation state of the ?-amino group switches between protonated and neutral states as the ?-site undergoes conversion from one intermediate to the next during catalysis, corresponding to mechanistic steps where this lysine residue has been anticipated to play alternating acid and base catalytic roles that help steer reaction specificity in tryptophan synthase catalysis. This article is part of a Special Issue entitled: Cofactor-dependent proteins: evolution, chemical diversity and bio-applications. Guest Editors: Andrea Mozzarelli and Loredano Pollegioni.

SUBMITTER: Caulkins BG 

PROVIDER: S-EPMC4506891 | biostudies-literature | 2015 Sep

REPOSITORIES: biostudies-literature