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Visualization of proteomics data using R and bioconductor.

ABSTRACT: Data visualization plays a key role in high-throughput biology. It is an essential tool for data exploration allowing to shed light on data structure and patterns of interest. Visualization is also of paramount importance as a form of communicating data to a broad audience. Here, we provided a short overview of the application of the R software to the visualization of proteomics data. We present a summary of R's plotting systems and how they are used to visualize and understand raw and processed MS-based proteomics data.

SUBMITTER: Gatto L 

PROVIDER: S-EPMC4510819 | biostudies-literature | 2015 Apr

REPOSITORIES: biostudies-literature

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Visualization of proteomics data using R and bioconductor.

Gatto Laurent L   Breckels Lisa M LM   Naake Thomas T   Gibb Sebastian S  

Proteomics 20150401 8

Data visualization plays a key role in high-throughput biology. It is an essential tool for data exploration allowing to shed light on data structure and patterns of interest. Visualization is also of paramount importance as a form of communicating data to a broad audience. Here, we provided a short overview of the application of the R software to the visualization of proteomics data. We present a summary of R's plotting systems and how they are used to visualize and understand raw and processed  ...[more]

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