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High-quality permanent draft genome sequence of the Parapiptadenia rigida-nodulating Cupriavidus sp. strain UYPR2.512.

ABSTRACT: Cupriavidus sp. strain UYPR2.512 is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated from a root nodule of Parapiptadenia rigida grown in soils from a native forest of Uruguay. Here we describe the features of Cupriavidus sp. strain UYPR2.512, together with sequence and annotation. The 7,858,949 bp high-quality permanent draft genome is arranged in 365 scaffolds of 369 contigs, contains 7,411 protein-coding genes and 76 RNA-only encoding genes, and is part of the GEBA-RNB project proposal.

SUBMITTER: De Meyer SE

PROVIDER: S-EPMC4511410 | biostudies-literature | 2015

REPOSITORIES: biostudies-literature

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High-quality permanent draft genome sequence of the Parapiptadenia rigida-nodulating Cupriavidus sp. strain UYPR2.512.

De Meyer Sofie E SE Fabiano Elena E Tian Rui R Van Berkum Peter P Seshadri Rekha R Reddy Tbk T Markowitz Victor V Ivanova Natalia N NN Pati Amrita A Woyke Tanja T Howieson John J Kyrpides Nikos C NC Reeve Wayne W

Standards in genomic sciences 20150411

Cupriavidus sp. strain UYPR2.512 is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated from a root nodule of Parapiptadenia rigida grown in soils from a native forest of Uruguay. Here we describe the features of Cupriavidus sp. strain UYPR2.512, together with sequence and annotation. The 7,858,949 bp high-quality permanent draft genome is arranged in 365 scaffolds of 369 contigs, contains 7,411 protein-coding genes and 76 RNA-only encoding genes, and is part of the GEBA-R ...[more]

PMID: 26203327

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