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Natural populations of Arabidopsis thaliana differ in seedling responses to high-temperature stress.

ABSTRACT: Little is known about adaptive within-species variation in thermotolerance in wild plants despite its likely role in both functional adaptation at range limits and in predicting response to climate change. Heat shock protein Hsp101, rapidly heat induced in Arabidopsis thaliana, plays a central role in thermotolerance in laboratory studies, yet little is known about variation in its expression in natural populations. We explored variation in thermotolerance and Hsp101 expression in seedlings from 16 natural populations of A. thaliana sampled along an elevation and climate gradient. We tested both naive controls (maintained at 22 °C until heat stress) and thermally pre-acclimated plants (exposed to a 38 °C 3-h acclimation treatment). After acclimation, seedlings were exposed to one of two heat stresses: 42 or 45 °C. Thermotolerance was measured as post-stress seedling survival and root growth. When stressed at 45 °C, both thermotolerance and Hsp101 expression were significantly increased by pre-acclimation. However, thermotolerance did not differ between pre-acclimation and control when followed by a 42 °C stress. Immediately after heat stress, pre-acclimated seedlings contained significantly more Hsp101 than control seedlings. At 45 °C, Hsp101 expression was positively associated with survival (r(2) = 0.37) and post-stress root growth (r(2) = 0.15). Importantly, seedling survival, post-stress root growth at 45 °C and Hsp101 expression at 42 °C were significantly correlated with the home sites' first principal component of climate variation. This climate gradient mainly reflects a temperature and precipitation gradient. Thus, the extent of Hsp101 expression modulation and thermotolerance appear to be interrelated and to evolve adaptively in natural populations of A. thaliana.

SUBMITTER: Zhang N

PROVIDER: S-EPMC4598537 | biostudies-literature | 2015 Aug

REPOSITORIES: biostudies-literature

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Natural populations of Arabidopsis thaliana differ in seedling responses to high-temperature stress.

Zhang Nana N Belsterling Brian B Raszewski Jesse J Tonsor Stephen J SJ

AoB PLANTS 20150817

Little is known about adaptive within-species variation in thermotolerance in wild plants despite its likely role in both functional adaptation at range limits and in predicting response to climate change. Heat shock protein Hsp101, rapidly heat induced in Arabidopsis thaliana, plays a central role in thermotolerance in laboratory studies, yet little is known about variation in its expression in natural populations. We explored variation in thermotolerance and Hsp101 expression in seedlings from ...[more]

PMID: 26286225

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Project description:Salt stress threatens plant growth, development and crop yields, and has become a critical global environmental issue. Increasing evidence has suggested that the epigenetic mechanism such as DNA methylation can mediate plant response to salt stress through transcriptional regulation and transposable element (TE) silencing. However, studies exploring genome-wide methylation dynamics under salt stress remain limited, in particular, for studies on multiple genotypes. Here, we adopted four natural accessions of the model species Arabidopsis thaliana and investigated the phenotypic and genome-wide methylation responses to salt stress through whole-genome bisulfite sequencing (WGBS). We found that salt stress significantly changed plant phenotypes, including plant height, rosette diameter, fruit number, and aboveground biomass, and the change in biomass tended to depend on accessions. Methylation analysis revealed that genome-wide methylation patterns depended primarily on accessions, and salt stress caused significant methylation changes in ∼ 0.1% cytosines over the genomes. About 33.5% of these salt-induced differential methylated cytosines (DMCs) were located to transposable elements (TEs). These salt-induced DMCs were mainly hypermethylated and accession-specific. TEs annotated to have DMCs (DMC-TEs) across accessions were found mostly belonged to the superfamily of Gypsy, a type II transposon, indicating a convergent DMC dynamic on TEs across different genetic backgrounds. Moreover, 8.0% of salt-induced DMCs were located in gene bodies and their proximal regulatory regions. These DMCs were also accession-specific, and genes annotated to have DMCs (DMC-genes) appeared to be more accession-specific than DMC-TEs. Intriguingly, both accession-specific DMC-genes and DMC-genes shared by multiple accessions were enriched in similar functions, including methylation, gene silencing, chemical homeostasis, polysaccharide catabolic process, and pathways relating to shifts between vegetative growth and reproduction. These results indicate that, across different genetic backgrounds, methylation changes may have convergent functions in post-transcriptional, physiological, and phenotypic modulation under salt stress. These convergent methylation dynamics across accession may be autonomous from genetic variation or due to convergent genetic changes, which requires further exploration. Our study provides a more comprehensive picture of genome-wide methylation dynamics under salt stress, and highlights the importance of exploring stress response mechanisms from diverse genetic backgrounds.

Dataset Information

Natural populations of Arabidopsis thaliana differ in seedling responses to high-temperature stress.

Publications

Natural populations of Arabidopsis thaliana differ in seedling responses to high-temperature stress.

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