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A common variant mapping to CACNA1A is associated with susceptibility to exfoliation syndrome.


ABSTRACT: Exfoliation syndrome (XFS) is the most common recognizable cause of open-angle glaucoma worldwide. To better understand the etiology of XFS, we conducted a genome-wide association study (GWAS) of 1,484 cases and 1,188 controls from Japan and followed up the most significant findings in a further 6,901 cases and 20,727 controls from 17 countries across 6 continents. We discovered a genome-wide significant association between a new locus (CACNA1A rs4926244) and increased susceptibility to XFS (odds ratio (OR) = 1.16, P = 3.36 × 10(-11)). Although we also confirmed overwhelming association at the LOXL1 locus, the key SNP marker (LOXL1 rs4886776) demonstrated allelic reversal depending on the ancestry group (Japanese: OR(A allele) = 9.87, P = 2.13 × 10(-217); non-Japanese: OR(A allele) = 0.49, P = 2.35 × 10(-31)). Our findings represent the first genetic locus outside of LOXL1 surpassing genome-wide significance for XFS and provide insight into the biology and pathogenesis of the disease.

SUBMITTER: Aung T 

PROVIDER: S-EPMC4605818 | biostudies-literature | 2015 Apr

REPOSITORIES: biostudies-literature

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A common variant mapping to CACNA1A is associated with susceptibility to exfoliation syndrome.

Aung Tin T   Ozaki Mineo M   Mizoguchi Takanori T   Allingham R Rand RR   Li Zheng Z   Haripriya Aravind A   Nakano Satoko S   Uebe Steffen S   Harder Jeffrey M JM   Chan Anita S Y AS   Lee Mei Chin MC   Burdon Kathryn P KP   Astakhov Yury S YS   Abu-Amero Khaled K KK   Zenteno Juan C JC   Nilgün Yildirim Y   Zarnowski Tomasz T   Pakravan Mohammad M   Safieh Leen Abu LA   Jia Liyun L   Wang Ya Xing YX   Williams Susan S   Paoli Daniela D   Schlottmann Patricio G PG   Huang Lulin L   Sim Kar Seng KS   Foo Jia Nee JN   Nakano Masakazu M   Ikeda Yoko Y   Kumar Rajesh S RS   Ueno Morio M   Manabe Shin-ichi S   Hayashi Ken K   Kazama Shigeyasu S   Ideta Ryuichi R   Mori Yosai Y   Miyata Kazunori K   Sugiyama Kazuhisa K   Higashide Tomomi T   Chihara Etsuo E   Inoue Kenji K   Ishiko Satoshi S   Yoshida Akitoshi A   Yanagi Masahide M   Kiuchi Yoshiaki Y   Aihara Makoto M   Ohashi Tsutomu T   Sakurai Toshiya T   Sugimoto Takako T   Chuman Hideki H   Matsuda Fumihiko F   Yamashiro Kenji K   Gotoh Norimoto N   Miyake Masahiro M   Astakhov Sergei Y SY   Osman Essam A EA   Al-Obeidan Saleh A SA   Owaidhah Ohoud O   Al-Jasim Leyla L   Al Shahwan Sami S   Fogarty Rhys A RA   Leo Paul P   Yetkin Yaz Y   Oğuz Çilingir Ç   Kanavi Mozhgan Rezaei MR   Beni Afsaneh Nederi AN   Yazdani Shahin S   Akopov Evgeny L EL   Toh Kai-Yee KY   Howell Gareth R GR   Orr Andrew C AC   Goh Yufen Y   Meah Wee Yang WY   Peh Su Qin SQ   Kosior-Jarecka Ewa E   Lukasik Urszula U   Krumbiegel Mandy M   Vithana Eranga N EN   Wong Tien Yin TY   Liu Yutao Y   Koch Allison E Ashley AE   Challa Pratap P   Rautenbach Robyn M RM   Mackey David A DA   Hewitt Alex W AW   Mitchell Paul P   Wang Jie Jin JJ   Ziskind Ari A   Carmichael Trevor T   Ramakrishnan Rangappa R   Narendran Kalpana K   Venkatesh Rangaraj R   Vijayan Saravanan S   Zhao Peiquan P   Chen Xueyi X   Guadarrama-Vallejo Dalia D   Cheng Ching Yu CY   Perera Shamira A SA   Husain Rahat R   Ho Su-Ling SL   Welge-Luessen Ulrich-Christoph UC   Mardin Christian C   Schloetzer-Schrehardt Ursula U   Hillmer Axel M AM   Herms Stefan S   Moebus Susanne S   Nöthen Markus M MM   Weisschuh Nicole N   Shetty Rohit R   Ghosh Arkasubhra A   Teo Yik Ying YY   Brown Matthew A MA   Lischinsky Ignacio I   Crowston Jonathan G JG   Coote Michael M   Zhao Bowen B   Sang Jinghong J   Zhang Nihong N   You Qisheng Q   Vysochinskaya Vera V   Founti Panayiota P   Chatzikyriakidou Anthoula A   Lambropoulos Alexandros A   Anastasopoulos Eleftherios E   Coleman Anne L AL   Wilson M Roy MR   Rhee Douglas J DJ   Kang Jae Hee JH   May-Bolchakova Inna I   Heegaard Steffen S   Mori Kazuhiko K   Alward Wallace L M WL   Jonas Jost B JB   Xu Liang L   Liebmann Jeffrey M JM   Chowbay Balram B   Schaeffeler Elke E   Schwab Matthias M   Lerner Fabian F   Wang Ningli N   Yang Zhenglin Z   Frezzotti Paolo P   Kinoshita Shigeru S   Fingert John H JH   Inatani Masaru M   Tashiro Kei K   Reis André A   Edward Deepak P DP   Pasquale Louis R LR   Kubota Toshiaki T   Wiggs Janey L JL   Pasutto Francesca F   Topouzis Fotis F   Dubina Michael M   Craig Jamie E JE   Yoshimura Nagahisa N   Sundaresan Periasamy P   John Simon W M SW   Ritch Robert R   Hauser Michael A MA   Khor Chiea-Chuen CC  

Nature genetics 20150223 4


Exfoliation syndrome (XFS) is the most common recognizable cause of open-angle glaucoma worldwide. To better understand the etiology of XFS, we conducted a genome-wide association study (GWAS) of 1,484 cases and 1,188 controls from Japan and followed up the most significant findings in a further 6,901 cases and 20,727 controls from 17 countries across 6 continents. We discovered a genome-wide significant association between a new locus (CACNA1A rs4926244) and increased susceptibility to XFS (odd  ...[more]

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