Unknown

Dataset Information

0

Correlation between mutations and mRNA expression of APC and MUTYH genes: new insight into hereditary colorectal polyposis predisposition.


ABSTRACT: Transcript dosage imbalance may influence the transcriptome. To gain insight into the role of altered gene expression in hereditary colorectal polyposis predisposition, in the present study we analyzed absolute and allele-specific expression (ASE) of adenomatous polyposis coli (APC) and mutY Homolog (MUTYH) genes.We analyzed DNA and RNA extracted from peripheral blood mononuclear cells (PBMC) of 49 familial polyposis patients and 42 healthy blood donors selected according similar gender and age. Patients were studied for germline alterations in both genes using dHPLC, MLPA and automated sequencing. APC and MUTYH mRNA expression levels were investigated by quantitative Real-Time PCR (qRT-PCR) analysis using TaqMan assay and by ASE assays using dHPLC-based primer extension.Twenty out of 49 patients showed germline mutations: 14 in APC gene and six in MUTYH gene. Twenty-nine patients did not show mutations in both genes. Results from qRT-PCR indicated that gene expression of both APC and MUTYH was reduced in patients analyzed. In particular, a significant reduction in APC expression was observed in patients without APC germline mutation vs control group (P?

SUBMITTER: Aceto GM 

PROVIDER: S-EPMC4625907 | biostudies-literature | 2015

REPOSITORIES: biostudies-literature

altmetric image

Publications

Correlation between mutations and mRNA expression of APC and MUTYH genes: new insight into hereditary colorectal polyposis predisposition.

Aceto Gitana Maria GM   Fantini Fabiana F   De Iure Sabrina S   Di Nicola Marta M   Palka Giandomenico G   Valanzano Rosa R   Di Gregorio Patrizia P   Stigliano Vittoria V   Genuardi Maurizio M   Battista Pasquale P   Cama Alessandro A   Curia Maria Cristina MC  

Journal of experimental & clinical cancer research : CR 20151028


<h4>Background</h4>Transcript dosage imbalance may influence the transcriptome. To gain insight into the role of altered gene expression in hereditary colorectal polyposis predisposition, in the present study we analyzed absolute and allele-specific expression (ASE) of adenomatous polyposis coli (APC) and mutY Homolog (MUTYH) genes.<h4>Methods</h4>We analyzed DNA and RNA extracted from peripheral blood mononuclear cells (PBMC) of 49 familial polyposis patients and 42 healthy blood donors selecte  ...[more]

Similar Datasets

| S-EPMC4698287 | biostudies-literature
| S-EPMC3410368 | biostudies-literature
| S-EPMC7933349 | biostudies-literature
| S-EPMC3770297 | biostudies-literature
| S-EPMC5440391 | biostudies-literature
| S-EPMC1735570 | biostudies-other
| S-EPMC2691665 | biostudies-literature
| S-EPMC7407923 | biostudies-literature
| S-EPMC8499431 | biostudies-literature
| S-EPMC2846260 | biostudies-literature