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Noncontiguous finished genome sequence and description of Weeksella massiliensis sp. nov.

ABSTRACT: Strain FF8(T) (= CSUR P860 = DSM 28259) was isolated in Dakar, Senegal, from the urine of a 65-year-old man with acute cystitis. This strain shows a similarity of sequence of 16S rRNA of 98.38% with Weeksella virosa, and its GenBank accession numbers are HG931340 and CCMH00000000. Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry analysis had a poor score, ranging from 1.32 to 1.56, that did not allow identification of the bacterium. Using a polyphasic study made of phenotypic and genomic analyses, strain FF8(T) was a Gram-negative, aerobic rod and a member of the family Flavobacteriaceae. The sequenced genome is 2?562?781 bp with one chromosome but no plasmid. It exhibits a G + C content of 35.9% and contains 2390 protein-coding and 56 RNA genes, including a complete rRNA operon. On the basis of these data, we propose the creation of Weeksella massiliensis sp. nov.

SUBMITTER: Sankar SA

PROVIDER: S-EPMC4644262 | biostudies-literature | 2015 Nov

REPOSITORIES: biostudies-literature

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Noncontiguous finished genome sequence and description of Weeksella massiliensis sp. nov.

Sankar S A SA Lo C I CI Fall B B Sambe-Ba B B Mediannikov O O Diallo I I Labas N N Faye N N Wade B B Raoult D D Fournier P-E PE Fenollar F F

New microbes and new infections 20151002

Strain FF8(T) (= CSUR P860 = DSM 28259) was isolated in Dakar, Senegal, from the urine of a 65-year-old man with acute cystitis. This strain shows a similarity of sequence of 16S rRNA of 98.38% with Weeksella virosa, and its GenBank accession numbers are HG931340 and CCMH00000000. Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry analysis had a poor score, ranging from 1.32 to 1.56, that did not allow identification of the bacterium. Using a polyphasic study made of ph ...[more]

PMID: 26649182

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