Ontology highlight
ABSTRACT:
SUBMITTER: Adkar-Purushothama CR
PROVIDER: S-EPMC4664692 | biostudies-literature | 2015 Dec
REPOSITORIES: biostudies-literature
Adkar-Purushothama Charith Raj CR Perreault Jean-Pierre JP Sano Teruo T
Genomics data 20150812
In order to analyze the production of small RNA (sRNA) by viroids upon infecting the plants, the tomato plants (Solanum lycopersicum cultivar Rutgers) were inoculated with the variants of Potato spindle tuber viroid (PSTVd). After 21-days of postinoculation, total RNA was extracted and subjected for deep-sequencing using Illumina HiSeq platform. The primers were trimmed and only 21- to 24-nt long sRNAs were filtered after quality check of the raw data. The filtered sRNA population was then mappe ...[more]