Dataset Information

Genotypic Variation under Fe Deficiency Results in Rapid Changes in Protein Expressions and Genes Involved in Fe Metabolism and Antioxidant Mechanisms in Tomato Seedlings (Solanum lycopersicum L.).

ABSTRACT: To investigate Fe deficiency tolerance in tomato cultivars, quantification of proteins and genes involved in Fe metabolism and antioxidant mechanisms were performed in "Roggusanmaru" and "Super Doterang". Fe deficiency (Moderate, low and -Fe) significantly decreased the biomass, total, and apoplastic Fe concentration of "Roggusanmaru", while a slight variation was observed in "Super Doterang" cultivar. The quantity of important photosynthetic pigments such as total chlorophyll and carotenoid contents significantly decreased in "Roggusanmaru" than "Super Doterang" cultivar. The total protein profile in leaves and roots determines that "Super Doterang" exhibited an optimal tolerance to Fe deficiency compared to "Roggusanmaru" cultivar. A reduction in expression of PSI (photosystem I), PSII (photosystem II) super-complexes and related thylakoid protein contents were detected in "Roggusanmaru" than "Super Doterang" cultivar. Moreover, the relative gene expression of SlPSI and SlPSII were well maintained in "Super Doterang" than "Roggusanmaru" cultivar. The relative expression of genes involved in Fe-transport (SlIRT1 and SlIRT2) and Fe(III) chelates reductase oxidase (SlFRO1) were relatively reduced in "Roggusanmaru", while increased in "Super Doterang" cultivar under Fe deficient conditions. The H?-ATPase relative gene expression (SlAHA1) in roots were maintained in "Super Doterang" compared to "Roggusanmaru". Furthermore, the gene expressions involved in antioxidant defense mechanisms (SlSOD, SlAPX and SlCAT) in leaves and roots showed that these genes were highly increased in "Super Doterang", whereas decreased in "Roggusanmaru" cultivar under Fe deficiency. The present study suggested that "Super Doterang" is better tomato cultivar than "Roggusanmaru" for calcareous soils.

SUBMITTER: Muneer S

PROVIDER: S-EPMC4691033 | biostudies-literature | 2015

REPOSITORIES: biostudies-literature

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Genotypic Variation under Fe Deficiency Results in Rapid Changes in Protein Expressions and Genes Involved in Fe Metabolism and Antioxidant Mechanisms in Tomato Seedlings (Solanum lycopersicum L.).

Muneer Sowbiya S Jeong Byoung Ryong BR

International journal of molecular sciences 20151125 12

To investigate Fe deficiency tolerance in tomato cultivars, quantification of proteins and genes involved in Fe metabolism and antioxidant mechanisms were performed in "Roggusanmaru" and "Super Doterang". Fe deficiency (Moderate, low and -Fe) significantly decreased the biomass, total, and apoplastic Fe concentration of "Roggusanmaru", while a slight variation was observed in "Super Doterang" cultivar. The quantity of important photosynthetic pigments such as total chlorophyll and carotenoid con ...[more]

PMID: 26602920

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Project description:BackgroundClimatic changes are the most important abiotic factor affecting plant growth, crop quality and nutritional value. Plants exposed to thermal stress respond by accumulation of secondary metabolites/molecules (SMs). Tomato (Solanum lycopersicum) is a cosmopolitan crop, eaten by most of the world's people because it is highly nutritious plant. It is cultivated in more than 16 thousand hectares in Saudi Arabia and thus is influenced by extreme climatic changes.ObjectiveIn the current study, the phytochemical effect of thermal stress was investigated in seedlings of S. lycopersicum. Such information will be very helpful in developing more tolerant tomato cultivars in a climate change scenario.MethodsSeedlings of S. lycopersicum were subjected to heat shock; HS1 and HS2 (45 and 50 °C) and cold shock; CS (4 °C) in comparison to control; Con (25 °C). Phenolic compounds, flavonoids, total phenolic content (TPC), total flavonoid content (TFC) and antioxidant activity were estimated under the four temperature treatments.ResultsUsing 23 standards (17 phenolic and six flavonoids), HPLC resulted in the estimation of 16, 20, 15 and 18 compounds for Con, CS, HS1 and HS2, respectively. Differences in the amounts of total phenolics, and total flavonoids were strongly correlated to thermal stress. CS plants exhibited the highest number of signals and the highest absolute quantities of total phenolics, flavonoids and sum of both. The major peaks of phenolics were (Chlorogenic acid, Resvertol), (Vanillic acid, Benzoic acid, Quinol), (Vanillic acid, Benzoic acid) and (Vanillic acid, Benzoic acid) for Con, CS, HS1 and HS2, respectively. The major peaks of flavonoids were (Quercetin, Myricetin), (Quercetin, Rutin), (Quercetin, Rutin, Catechin) and (Quercetin) for Con, CS, HS1 and HS2, respectively. CS plants contain the highest amounts of Benzoic acid (8010.37 mg/kg FW) and Quercetin (2319.48 mg/kg FW). The highest TPC (131 mg GAE/100 g FW) and TFC (61 mg QE/100 g FW) were determined in the case of CS plants. In terms of IC50s, the CS plants showed the highest antioxidant activities (lowest values) in both of DPPH (467.73 µM TE/100 g FW) and ABTS (8.97 µM TE/100 g FW) assays.ConclusionsOur findings supported that the complexity and quantity of phenolics and flavonoids in tomato's extract are strongly related to thermal stress. Additionally, the CS plants demonstrated more desirable phytochemical profile over the other treatments. CS plants exhibited higher number, absolute amounts of SMs, higher TPC and TFC than those of Con, HS1 and HS2 plants. Additionally, CS plants showed higher antioxidant activity than that of both HS1 and HS2 plants. Such results are very useful in justifying mechanism of tolerance in tomato plant to thermal stress in the context of climate change. Additional research has turned on to reveal molecular response of tomato to such thermal stress.

Dataset Information

Genotypic Variation under Fe Deficiency Results in Rapid Changes in Protein Expressions and Genes Involved in Fe Metabolism and Antioxidant Mechanisms in Tomato Seedlings (Solanum lycopersicum L.).

Publications

Genotypic Variation under Fe Deficiency Results in Rapid Changes in Protein Expressions and Genes Involved in Fe Metabolism and Antioxidant Mechanisms in Tomato Seedlings (Solanum lycopersicum L.).

Similar Datasets

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