Unknown

Dataset Information

0

Priorities and trends in the study of proteins in eye research, 1924-2014.


ABSTRACT: To identify the proteins that are relevant to eye research and develop assays for the study of a set of these proteins.We conducted a bibliometric analysis by merging gene lists for human and mouse from the National Center for Biotechnology Information FTP site and combining them with PubMed references that were retrieved with the search terms "eye" [MeSH Terms] OR "eye" [All Fields] OR "eyes" [All Fields].For human and mouse eye studies, respectively, the total number of publications was 13,525 and 23,895 and the total number of proteins was 4050 and 4717. For proteins in human and mouse eye studies, respectively, 88.7 and 81.7% had five or fewer citations. The top 50 most intensively studied proteins for human and mouse eye studies were generally in the areas of photoreceptors and phototransduction, inflammation, and angiogenesis, neurodevelopment, lens transparency, and cell-cycle and cellular processes. We proposed selected reaction monitoring assays that were developed in silico for the top fifty most intensively studied proteins in human and mouse eye research.We conclude that scientists engaged in eye research tend to focus on the same proteins. Newer resources and tools in proteomics can expand the investigations to lesser-known proteins of the eye.

SUBMITTER: Semba RD 

PROVIDER: S-EPMC4695326 | biostudies-literature | 2015 Dec

REPOSITORIES: biostudies-literature

altmetric image

Publications

Priorities and trends in the study of proteins in eye research, 1924-2014.

Semba Richard D RD   Lam Maggie M   Sun Kai K   Zhang Pingbo P   Schaumberg Debra A DA   Ferrucci Luigi L   Ping Peipei P   Van Eyk Jennifer E JE  

Proteomics. Clinical applications 20150916 11-12


<h4>Purpose</h4>To identify the proteins that are relevant to eye research and develop assays for the study of a set of these proteins.<h4>Experimental design</h4>We conducted a bibliometric analysis by merging gene lists for human and mouse from the National Center for Biotechnology Information FTP site and combining them with PubMed references that were retrieved with the search terms "eye" [MeSH Terms] OR "eye" [All Fields] OR "eyes" [All Fields].<h4>Results</h4>For human and mouse eye studie  ...[more]

Similar Datasets

| S-EPMC4728026 | biostudies-literature
| S-EPMC5678755 | biostudies-literature
| S-EPMC11320310 | biostudies-literature
| S-EPMC8116279 | biostudies-literature
| S-EPMC7066012 | biostudies-literature
| S-EPMC7042322 | biostudies-literature
| S-EPMC2643054 | biostudies-literature
| S-EPMC4375392 | biostudies-literature
| S-EPMC4895878 | biostudies-other
| S-EPMC9014064 | biostudies-literature