SNPTracker: A Swift Tool for Comprehensive Tracking and Unifying dbSNP rs IDs and Genomic Coordinates of Massive Sequence Variants.
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ABSTRACT:
SUBMITTER: Deng JE
PROVIDER: S-EPMC4704719 | biostudies-literature | 2015 Nov
REPOSITORIES: biostudies-literature
Publications
SNPTracker: A Swift Tool for Comprehensive Tracking and Unifying dbSNP rs IDs and Genomic Coordinates of Massive Sequence Variants.
Deng Jia-En JE Sham Pak C PC Li Miao-Xin MX
G3 (Bethesda, Md.) 20151119 1
The reference single nucleotide polymorphism (rs) ID in dbSNP (http://www.ncbi.nlm.nih.gov/SNP/) is a key resource identifier, which is widely used in human genetics and genomics studies. However, its application is often complicated by the varied IDs of different versions. Here, we developed a user-friendly tool, SNPTracker, for comprehensively tracking and unifying the rs IDs and genomic coordinates of massive sequence variants at a time. It worked perfectly, and had much higher accuracy and c ...[more]
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