Unknown

Dataset Information

0

A radiosensitivity MiRNA signature validated by the TCGA database for head and neck squamous cell carcinomas.


ABSTRACT: MicroRNA, a class of small non-coding RNAs, play critical roles in the cellular response to DNA damage induced by ionizing irradiation (IR). Growing evidence shows alteration of miRNAs, in response to radiation, controls cellular radiosensitivity in DNA damage response pathways. However, it is less clear about the clinical relevance of miRNA regulation in radiosensitivity. Using an in vitro system, we conducted microarray to identify a miRNA signature to assess radiosensitivity. The data were validated by analyzing available Head and Neck Squamous Cell Carcinoma (HNSCC) samples in the cancer genome atlas (TCGA) database. A total of 27 miRNAs showed differential alteration in response to IR in an Ataxia-Telangiectasia Mutated (ATM) kinase-dependent manner. We validated the list and identified a five miRNA signature that can predict radiation responsiveness in HNSCC. Furthermore, we found that the expression level of ATM in these patients was correlated with the radiation responsiveness. Together, we demonstrate the feasibility of using a miRNA signature to predict the clinical responsiveness of HNSCC radiotherapy.

SUBMITTER: Liu N 

PROVIDER: S-EPMC4741479 | biostudies-literature | 2015 Oct

REPOSITORIES: biostudies-literature

altmetric image

Publications

A radiosensitivity MiRNA signature validated by the TCGA database for head and neck squamous cell carcinomas.

Liu Ning N   Boohaker Rebecca J RJ   Jiang Chunling C   Boohaker James R JR   Xu Bo B  

Oncotarget 20151001 33


MicroRNA, a class of small non-coding RNAs, play critical roles in the cellular response to DNA damage induced by ionizing irradiation (IR). Growing evidence shows alteration of miRNAs, in response to radiation, controls cellular radiosensitivity in DNA damage response pathways. However, it is less clear about the clinical relevance of miRNA regulation in radiosensitivity. Using an in vitro system, we conducted microarray to identify a miRNA signature to assess radiosensitivity. The data were va  ...[more]

Similar Datasets

| S-EPMC8025193 | biostudies-literature
| S-EPMC5382363 | biostudies-literature
| S-EPMC7533413 | biostudies-literature
2009-03-12 | GSE12020 | GEO
2009-03-11 | E-GEOD-12020 | biostudies-arrayexpress
| S-EPMC7163094 | biostudies-literature
2017-02-18 | GSE95036 | GEO
| S-EPMC4311405 | biostudies-literature
| S-EPMC7736982 | biostudies-literature
| S-EPMC10980800 | biostudies-literature