Dataset Information

Marine mammals harbor unique microbiotas shaped by and yet distinct from the sea.

ABSTRACT: Marine mammals play crucial ecological roles in the oceans, but little is known about their microbiotas. Here we study the bacterial communities in 337 samples from 5 body sites in 48 healthy dolphins and 18 healthy sea lions, as well as those of adjacent seawater and other hosts. The bacterial taxonomic compositions are distinct from those of other mammals, dietary fish and seawater, are highly diverse and vary according to body site and host species. Dolphins harbour 30 bacterial phyla, with 25 of them in the mouth, several abundant but poorly characterized Tenericutes species in gastric fluid and a surprisingly paucity of Bacteroidetes in distal gut. About 70% of near-full length bacterial 16S ribosomal RNA sequences from dolphins are unique. Host habitat, diet and phylogeny all contribute to variation in marine mammal distal gut microbiota composition. Our findings help elucidate the factors structuring marine mammal microbiotas and may enhance monitoring of marine mammal health.

SUBMITTER: Bik EM

PROVIDER: S-EPMC4742810 | biostudies-literature | 2016 Feb

REPOSITORIES: biostudies-literature

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Marine mammals harbor unique microbiotas shaped by and yet distinct from the sea.

Bik Elisabeth M EM Costello Elizabeth K EK Switzer Alexandra D AD Callahan Benjamin J BJ Holmes Susan P SP Wells Randall S RS Carlin Kevin P KP Jensen Eric D ED Venn-Watson Stephanie S Relman David A DA

Nature communications 20160203

Marine mammals play crucial ecological roles in the oceans, but little is known about their microbiotas. Here we study the bacterial communities in 337 samples from 5 body sites in 48 healthy dolphins and 18 healthy sea lions, as well as those of adjacent seawater and other hosts. The bacterial taxonomic compositions are distinct from those of other mammals, dietary fish and seawater, are highly diverse and vary according to body site and host species. Dolphins harbour 30 bacterial phyla, with 2 ...[more]

PMID: 26839246

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Project description:The U.S. Endangered Species Act (ESA) is a powerful environmental law protecting imperiled plants and animals, and a growing number of marine species have been protected under this law as extinction risk in the oceans has increased. Marine mammals and sea turtles comprise 38% of the 163 ESA-listed marine "species", which includes subspecies and distinct population segments, yet analyses of recovery trends after listing are lacking. Here we gathered the best available annual abundance estimates for geographically delimited populations of all 62 marine mammal and sea turtle species listed under the ESA. Of these, we chose representative populations of species that were listed before 2012, occur and reproduce in U.S. waters, and have data of sufficient quality and timespan for trend analyses. Thus, we quantitatively analyzed population trends, magnitude of population change, and recovery status for 23 and 8 representative populations of 14 marine mammal and 5 sea turtle species, respectively. Using generalized linear and non-linear models, we found that 18 marine mammal (78%) and 6 sea turtle (75%) populations significantly increased after listing; 3 marine mammal (13%) and 2 sea turtle (25%) populations showed non-significant changes; while 2 marine mammal (9%), but no sea turtle populations declined after ESA protection. Overall, the 24 populations that increased in abundance were from species listed for 20 years or more (e.g., large whales, manatees, and sea turtles). Conservation measures triggered by ESA listing such as ending exploitation, tailored species management, and fishery regulations, and other national and international measures, appear to have been largely successful in promoting species recovery, leading to the delisting of some species and to increases in most populations. These findings underscore the capacity of marine mammal and sea turtle species to recover from substantial geographical population declines when conservation actions are implemented in a timely and effective manner.

Dataset Information

Marine mammals harbor unique microbiotas shaped by and yet distinct from the sea.

Publications

Marine mammals harbor unique microbiotas shaped by and yet distinct from the sea.

Similar Datasets

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