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Complete Genome Sequence of a Porcine Epidemic Diarrhea Virus Strain from Vietnam, HUA-14PED96, with a Large Genomic Deletion.

ABSTRACT: A highly virulent strain of Porcine epidemic diarrhea virus (PEDV) causing severe diarrhea has recently emerged in Vietnam. Genomic sequences from a novel strain, HUA-14PED96, isolated from a Vietnamese piglet with serious diarrhea show relatively high identity with U.S.-like PEDV strains, and have a 72-nt deletion in the open reading frame 1a (ORF1a) gene.

SUBMITTER: Choe SE

PROVIDER: S-EPMC4759056 | biostudies-literature | 2016 Feb

REPOSITORIES: biostudies-literature

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Complete Genome Sequence of a Porcine Epidemic Diarrhea Virus Strain from Vietnam, HUA-14PED96, with a Large Genomic Deletion.

Choe Se-Eun SE Park Kee-Hwan KH Lim Seong-In SI Le Van Phan VP Hien Nguyen Ba NB Thach Pham Ngoc PN Phuong Le Huynh Thanh le HT An Byung-Hyun BH Han Song Hee SH Cho In-Soo IS An Dong-Jun DJ

Genome announcements 20160218 1

A highly virulent strain of Porcine epidemic diarrhea virus (PEDV) causing severe diarrhea has recently emerged in Vietnam. Genomic sequences from a novel strain, HUA-14PED96, isolated from a Vietnamese piglet with serious diarrhea show relatively high identity with U.S.-like PEDV strains, and have a 72-nt deletion in the open reading frame 1a (ORF1a) gene. ...[more]

PMID: 26893409

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