Dataset Information

Genomic and phenotypic characterization of the species Acinetobacter venetianus.

ABSTRACT: Crude oil is a complex mixture of hydrocarbons and other organic compounds that can produce serious environmental problems and whose removal is highly demanding in terms of human and technological resources. The potential use of microbes as bioremediation agents is one of the most promising fields in this area. Members of the species Acinetobacter venetianus have been previously characterized for their capability to degrade n-alkanes and thus may represent interesting model systems to implement this process. Although a preliminary experimental characterization of the overall hydrocarbon degradation capability has been performed for five of them, to date, the genetic/genomic features underlying such molecular processes have not been identified. Here we have integrated genomic and phenotypic information for six A. venetianus strains, i.e. VE-C3, RAG-1(T), LUH 13518, LUH 7437, LUH 5627 and LUH 8758. Besides providing a thorough description of the A. venetianus species, these data were exploited to infer the genetic features (presence/absence patterns of genes) and the short-term evolutionary events possibly responsible for the variability in n-alkane degradation efficiency of these strains, including the mechanisms of interaction with the fuel droplet and the subsequent catabolism of this pollutant.

SUBMITTER: Fondi M

PROVIDER: S-EPMC4763211 | biostudies-literature | 2016 Feb

REPOSITORIES: biostudies-literature

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Genomic and phenotypic characterization of the species Acinetobacter venetianus.

Fondi Marco M Maida Isabel I Perrin Elena E Orlandini Valerio V La Torre Laura L Bosi Emanuele E Negroni Andrea A Zanaroli Giulio G Fava Fabio F Decorosi Francesca F Giovannetti Luciana L Viti Carlo C Vaneechoutte Mario M Dijkshoorn Lenie L Fani Renato R

Scientific reports 20160223

Crude oil is a complex mixture of hydrocarbons and other organic compounds that can produce serious environmental problems and whose removal is highly demanding in terms of human and technological resources. The potential use of microbes as bioremediation agents is one of the most promising fields in this area. Members of the species Acinetobacter venetianus have been previously characterized for their capability to degrade n-alkanes and thus may represent interesting model systems to implement ...[more]

PMID: 26902269

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Dataset Information

Genomic and phenotypic characterization of the species Acinetobacter venetianus.

Publications

Genomic and phenotypic characterization of the species Acinetobacter venetianus.

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