Browse
Submit Data
Databases
API
Help

Dataset Information

27 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Systematic review of the firefly genus Scissicauda (Coleoptera, Lampyridae, Amydetinae) from Brazil.

ABSTRACT: The Amydetinae genus Scissicauda McDermott, 1964 is reviewed and redescribed. We describe Scissicauda balena sp. n. from Brazil as new, and provide illustrations of the structural features and a key to species of both sexes.

SUBMITTER: Silveira LF

PROVIDER: S-EPMC4768280 | biostudies-literature | 2016

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

Systematic review of the firefly genus Scissicauda (Coleoptera, Lampyridae, Amydetinae) from Brazil.

Silveira Luiz Felipe Lima Da LF Mermudes José Ricardo M JR Bocakova Milada M

ZooKeys 20160201 558

The Amydetinae genus Scissicauda McDermott, 1964 is reviewed and redescribed. We describe Scissicauda balena sp. n. from Brazil as new, and provide illustrations of the structural features and a key to species of both sexes. ...[more]

PMID: 27006595

Similar Datasets

Molecular Systematics of the Firefly Genus Luciola (Coleoptera: Lampyridae: Luciolinae) with the Description of a New Species from Singapore.

Project description:The firefly genus Luciola sensu McDermott contains 282 species that are distributed across major parts of Asia, Europe, Africa, Australia, and the Pacific islands. Due to phenotypic similarities, species identification using external morphological characters can be unreliable for this group. Consequently, decades of piecemeal taxonomic treatments have resulted in numerous erroneous and contentious classifications. Furthermore, our understanding of the group's evolutionary history is limited due to the lack of a robust phylogenetic framework that has also impeded efforts to stabilize its taxonomy. Here, we constructed molecular phylogenies of Luciola and its allies based on combined mitogenomes and Cytochrome c oxidase subunit 1 (COX1) sequences including a newly sequenced mitogenome of an unidentified taxon from Singapore. Our results showed that this taxon represents a distinct and hitherto undescribed evolutionary lineage that forms a clade with L. filiformis from Japan and L. curtithorax from China. Additionally, the Singaporean lineage can be differentiated from other congeners through several external and internal diagnostic morphological characters, and is thus described herein as a new species. Our phylogeny also strongly supported the paraphyly of Luciola with regard to L. cruciata and L. owadai, which were inferred to be more closely related to the genus Aquatica as opposed to other members of Luciola sensu stricto. The genus Hotaria was inferred as a derived clade within Luciola (sister to L. italica), supporting its status as a subgenus of Luciola instead of a distinct genus. This is the first time since 1909 that a new species of luminous firefly has been discovered in Singapore, highlighting the need for continued biodiversity research, even in small, well-studied and highly developed countries, such as Singapore.

| S-EPMC7998795 | biostudies-literature

The complete mitochondrial genome of the firefly, Luciola curtithorax (Coleoptera: Lampyridae).

Project description:We report the complete mitochondrial genome of firefly, Luciola curtithorax. The circular genome of 16,882?bp has a base composition of A (44.98%), C (11.84%), G (8.15%), and T (35.03%). Our sequence is similar to other Metazoa, which contains 13 protein-coding genes. All 13 protein-coding genes were initiated by the ATN (ATT, ATA, and ATG) codon. Ten protein-coding genes stopped with TAA or TAG codon and the other three genes have an incomplete termination codon, a single T--. We sequenced the mitochondrial genome of fireflies to analyze phylogenetic relationships and deduce the evolution of their flashing signals.

| S-EPMC7800498 | biostudies-literature

The complete mitochondrial genome of the firefly, Pteroptyx maipo (Coleoptera: Lampyridae).

Project description:We report the complete mitochondrial genome of firefly, Pteroptyx maipo. The circular genome of 16,127?bp has a base composition of A (44.22%), C (11.60%), G (8.23%) and T (35.96%). Our sequence is similar to other Metazoa, which contains 13 protein-coding genes. All 13 protein-coding genes were initiated by the ATN (ATT, ATA and ATG) codon. Nine protein-coding genes stopped with TAA or TAG codon and the other four genes have an incomplete termination codon, a single T. We sequenced the mitochondrial genome of fireflies to analyze phylogenetic relationships and deduce the evolution of their flashing signals.

| S-EPMC7799747 | biostudies-literature

The complete mitochondrial genome of the firefly, Diaphanes citrinus (Olivier), (coleoptera: Lampyridae).

Project description:We report the complete mitochondrial genome of firefly, Diaphanes citrinus (Olivier). The circular genome of 18,594?bp and has a base composition of A (41.26%), C (11.64%), G (10.18%), T (36.92%). Similar to other Metazoa, our sequence contains 13 protein-coding genes, 21 transfer RNA genes, two ribosomal RNA genes, and a non-coding AT-rich region. We sequenced the mitochondrial genome of fireflies to analyze phylogenetic relationships and deduce the evolution of their flashing signals.

| S-EPMC7706614 | biostudies-literature

The complete mitochondrial genome of the firefly, Abscondita anceyi (Olivier) (Coleoptera: Lampyridae).

Project description:We report the complete mitochondrial genome of firefly, Abscondita anceyi (Olivier). The circular genome of 16,519?bp has a base composition of A (43.81%), C (11.80%), G (8.35%), and T (36.03%). Similar to other Metazoa, our sequence contains 13 protein-coding genes, 22 transfer RNA genes, two ribosomal RNA genes, and a non-coding AT-rich region. We sequenced the mitochondrial genome of fireflies to analyse phylogenetic relationships and deduce the evolution of their flashing signals.

| S-EPMC7800902 | biostudies-literature

The complete mitochondrial genome of the firefly, Asymmetricata circumdata (Motschulsky) (Coleoptera: Lampyridae).

Project description:We report the complete mitochondrial genome of firefly, Asymmetricata circumdata (Motschulsky).The circular genome of 15,967?bp has a base composition of A (42.44%), C (12.83%), G (8.79%) and T (36.16%). Similar to other Metazoa, our sequence contains 13 protein-coding genes. All 13 protein-coding genes were initiated by the ATN (ATT, ATA and ATG) codon. Eight protein-coding genes stopped with TAA or TAG codon and the other 5 genes have an incomplete termination codon, a single T. We sequenced the mitochondrial genome of fireflies to analyze phylogenetic relationships and deduce the evolution of their flashing signals.

| S-EPMC7800248 | biostudies-literature

Complete mitochondrial genome of the Korean endemic firefly, Luciola unmunsana (Coleoptera: Lampyridae).

Project description:In this study, we announce the complete mitochondrial genome (mitogenome) of the Korean endemic firefly, Luciola unmunsana Doi, 1931. The full-length circular genome was 15,858 bp, with 77.94% A/T content. It contained the typical set of 37 metazoan genes: 13 protein-coding genes (PCGs), 22 transfer RNA (tRNA) genes, and 2 ribosomal RNA (rRNA) genes, as well as an A + T-rich region. The gene arrangement of the species is identical to that of the ancestral arrangement found in the majority of insects. The maximum-likelihood tree, built using all PCGs and two rRNAs via randomized accelerated maximum likelihood (RAxML) showed that L. unmunsana was grouped as a sister to L. curtithorax with the highest nodal support. However, another Luciola species clustered with the Aquatica species such that the genus Luciola was a non-monophyletic group. Therefore, more sampling is required to clarify the phylogeny of Luciola.

| S-EPMC7782064 | biostudies-literature

The complete mitogenome and phylogenetic analysis of Japanese firefly 'Genji Botaru' Luciola cruciata (Coleoptera: Lampyridae).

Project description:We performed mitogenome analysis of Japanese firefly Luciola cruciata (Coleoptera: Lampyridae), which is unique species in Japan. It is classified into six haplotypes based on the difference of COII sequence on mitochondrial DNA. The complete mitogenome sequence of Tohoku group has been registered so far, we newly analysed West Japan groups which belong to different haplotype. The total length of analysed mitogenome was 15,990?bp, being one base longer than the case of Tohoku's firefly. The base substitution was found at 273 positions over the whole mitochondrial sequence, while amino acid substitution accompanying it was observed at only 11 positions.

| S-EPMC7800388 | biostudies-literature

Reconstruction of insect hormone pathways in an aquatic firefly, Sclerotia aquatilis (Coleoptera: Lampyridae), using RNA-seq.

Project description:Insect hormones: ecdysteroids and juvenile hormones have crucial functions during the regulation of different developmental pathways in insects. Insect metamorphosis is one of the primary pathways regulated by these hormones. The insect hormone biosynthetic pathway is conserved among arthropods, including insects, with some variations in the form of hormones used among each group of insects. In this study, the candidate genes involved in the insect hormone pathways and their functional roles were assessed in an aquatic firefly, Sclerotia aquatilis using a high-throughput RNA sequencing technique. Illumina next-generation sequencing (NGS) was used to generate transcriptome data for the different developmental stages (i.e., larva, pupa, and adult) of S. aquatilis. A total of 82,022 unigenes were generated across all different developmental stages. Functional annotation was performed for each gene, based on multiple biological databases, generating 46,230 unigenes. These unigenes were subsequently mapped using KEGG pathways. Accordingly, 221 protein-encoding genes involved in the insect hormone pathways were identified, including, JHAMT, CYP15A1, JHE, and Halloween family genes. Twenty potential gene candidates associated with the biosynthetic and degradation pathways for insect hormones were subjected to real-time PCR, reverse transcriptase PCR (RT-PCR) and sequencing analyses. The real-time PCR results showed similar expression patterns as those observed for transcriptome expression profiles for most of the examined genes. RT-PCR and Sanger sequencing confirmed the expressed coding sequences of these gene candidates. This study is the first to examine firefly insect hormone pathways, facilitating a better understanding of firefly growth and development.

| S-EPMC6681800 | biostudies-literature

Haplocauda, a New Genus of Fireflies Endemic to the Amazon Rainforest (Coleoptera: Lampyridae).

Project description:Most firefly genera have poorly defined taxonomic boundaries, especially in the Neotropics, where they are more diverse and more difficult to identify. Recent advances that shed light on the diversity of fireflies in South America have focused mainly on Atlantic Rainforest taxa, whereas lampyrids in other biomes remained largely unstudied. We found three new firefly species endemic to the Amazon basin that share unique traits of the male abdomen where sternum VIII and the pygidium are modified and likely work as a copulation clamp. Here we test and confirm the hypothesis that these three species form a monophyletic lineage and propose Haplocaudagen. nov. to accommodate the three new species. Both maximum parsimony and probabilistic (Bayesian and maximum likelihood) phylogenetic analyses confirmed Haplocaudagen. nov. monophyly, and consistently recovered it as the sister group to Scissicauda, fireflies endemic to the Atlantic Rainforest that also feature a copulation clamp on abdominal segment VIII, although with a different configuration. We provide illustrations, diagnostic descriptions, and keys to species based on males and females. The three new species were sampled from different regions, and are likely allopatric, a common pattern among Amazonian taxa.

| S-EPMC8778453 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data