Dataset Information

Habitat-based cetacean density models for the U.S. Atlantic and Gulf of Mexico.

ABSTRACT: Cetaceans are protected worldwide but vulnerable to incidental harm from an expanding array of human activities at sea. Managing potential hazards to these highly-mobile populations increasingly requires a detailed understanding of their seasonal distributions and habitats. Pursuant to the urgent need for this knowledge for the U.S. Atlantic and Gulf of Mexico, we integrated 23 years of aerial and shipboard cetacean surveys, linked them to environmental covariates obtained from remote sensing and ocean models, and built habitat-based density models for 26 species and 3 multi-species guilds using distance sampling methodology. In the Atlantic, for 11 well-known species, model predictions resembled seasonal movement patterns previously suggested in the literature. For these we produced monthly mean density maps. For lesser-known taxa, and in the Gulf of Mexico, where seasonal movements were less well described, we produced year-round mean density maps. The results revealed high regional differences in small delphinoid densities, confirmed the importance of the continental slope to large delphinoids and of canyons and seamounts to beaked and sperm whales, and quantified seasonal shifts in the densities of migratory baleen whales. The density maps, freely available online, are the first for these regions to be published in the peer-reviewed literature.

SUBMITTER: Roberts JJ

PROVIDER: S-EPMC4776172 | biostudies-literature | 2016 Mar

REPOSITORIES: biostudies-literature

ACCESS DATA

Publications

Habitat-based cetacean density models for the U.S. Atlantic and Gulf of Mexico.

Roberts Jason J JJ Best Benjamin D BD Mannocci Laura L Fujioka Ei E Halpin Patrick N PN Palka Debra L DL Garrison Lance P LP Mullin Keith D KD Cole Timothy V N TV Khan Christin B CB McLellan William A WA Pabst D Ann DA Lockhart Gwen G GG

Scientific reports 20160303

Cetaceans are protected worldwide but vulnerable to incidental harm from an expanding array of human activities at sea. Managing potential hazards to these highly-mobile populations increasingly requires a detailed understanding of their seasonal distributions and habitats. Pursuant to the urgent need for this knowledge for the U.S. Atlantic and Gulf of Mexico, we integrated 23 years of aerial and shipboard cetacean surveys, linked them to environmental covariates obtained from remote sensing an ...[more]

PMID: 26936335

Similar Datasets

Project description:Common bottlenose dolphins serve as sentinels for the health of their coastal environments as they are susceptible to health impacts from anthropogenic inputs through both direct exposure and food web magnification. Remote biopsy samples have been widely used to reveal contaminant burdens in free-ranging bottlenose dolphins, but do not address the health consequences of this exposure. To gain insight into whether remote biopsies can also identify health impacts associated with contaminant burdens, we employed RNA sequencing (RNA-seq) to interrogate the transcriptomes of remote skin biopsies from 116 bottlenose dolphins from the northern Gulf of Mexico and southeastern U.S. Atlantic coasts. Gene expression was analyzed using principal component analysis, differential expression testing, and gene co-expression networks, and the results correlated to season, location, and contaminant burden. Season had a significant impact, with over 30% of genes differentially expressed between spring/summer and winter months. Geographic location exhibited lesser effects on the transcriptome, with 15% of genes differentially expressed between the northern Gulf of Mexico and the southeastern U.S. Atlantic locations. Despite a large overlap between the seasonal and geographical gene sets, the pathways altered in the observed gene expression profiles were somewhat distinct. Co-regulated gene modules and differential expression analysis both identified epidermal development and cellular architecture pathways to be expressed at lower levels in animals from the northern Gulf of Mexico. Although contaminant burdens measured were not significantly different between regions, some correlation with contaminant loads in individuals was observed among co-expressed gene modules, but these did not include classical detoxification pathways. Instead, this study identified other, possibly downstream pathways, including those involved in cellular architecture, immune response, and oxidative stress, that may prove to be contaminant responsive markers in bottlenose dolphin skin.

Project description:Habitat shifts that occur during the life cycles of marine fishes influence population connectivity and structure. A generalized additive modeling approach was used to characterize relationships between environmental variables and the relative abundance of red snapper Lutjanus campechanus over unconsolidated substrate on the continental shelf (<150 m) of the U.S. Gulf of Mexico (GoM) at three different life stages: juvenile (age-0, <125 mm FL), sub-adult (age-1-2, 125-300 mm FL), and adult (age-2+, >300 mm FL). Fisheries independent data (2008-2014) were used to develop separate models for both the eastern and western GoM, and final models were used to predict the relative availability of suitable habitat for each life stage across the two regions. Predictor variables included in final models varied by age class and region, with depth, dissolved oxygen, longitude, and distance to artificial structure common to most models. Depth was among the most influential variables in all models, and preferred depth increased with increasing size/age. Regional differences in fish-habitat relationships were also observed, as relative abundance of larger red snapper over unconsolidated substrates was more closely linked to artificial structure in the eastern GoM. The location of predicted high quality habitat for juvenile red snapper was greatest on the inner Texas shelf and a smaller area east of the Mississippi River Delta, suggesting these two areas may represent important nursery grounds for the respective regions. Clear ontogenetic shifts in the spatial distribution of predicted high quality habitat were evident in both the eastern (expansion from west to east with age) and western (shift from inshore to offshore) GoM. Given the unique population dynamics between the eastern and western GoM, improving our understanding of spatial and temporal variability in habitat quality may be important to maintaining connectivity between juvenile and adult habitats, and may enhance recovery and management of red snapper stocks in the GoM.

Project description:BackgroundThe Gulf of Mexico (GOM) is a semi-enclosed sea where the waters of the United States, Mexico and Cuba converge. Al least 21 species of cetaceans inhabit it. The only mysticete (baleen whale) is found in the northeast (U.S. waters). The distribution of the 20 species of odontocetes (toothed cetaceans) is well understood in U.S. waters, but practically unknown in Mexican and Cuban waters. In this study we used sighting data from several odontocete species to construct habitat suitability maps in order to identify geographical regions suitable for high diversity throughout the GOM.MethodsHistorical datasets of georeferenced sightings from across the GOM were used to implement the maximum entropy algorithm (MaxEnt) to model the habitat suitability of each species. Five environmental predictors were used, selected for their influence over the occurrence of cetaceans: two oceanographic predictors (sea surface temperature and chlorophyll-a concentration), and three bathymetric predictors (depth, slope, and distance to 200-m isobath). A spatial approach based on the habitat suitability maps was used to identify the suitable regions.ResultsOnly 12 species were modeled, which were the ones with the minimum sample size required. The models performed well, showing good discriminatory power and slight overfitting. Overall, depth, minimum sea surface temperature, and bottom slope were the most contributing predictor in the models. High suitability areas of 10 species were located on the continental slope, and four suitable regions were identified: (1) the Mississippi Canyon and the Louisiana-Texas slope in the northern GOM, (2) the west Florida slope in the east-northeastern GOM, (3) the Rio Grande slope in the west-northwestern GOM, and (4) the Tamaulipas-Veracruz slope in the west-southwestern GOM.ConclusionsWe were able to detect four geographic regions in the GOM where a high diversity of odontocetes is expected, all located on the continental slope. Although the methodology to identify them (spatial overlap) is a very conservative approach, it is useful for conservation and management purposes. The paucity of data did not allow all species to be modeled, which highlights the importance of establishing transboundary monitoring programs.

Dataset Information

Habitat-based cetacean density models for the U.S. Atlantic and Gulf of Mexico.

Publications

Habitat-based cetacean density models for the U.S. Atlantic and Gulf of Mexico.

Similar Datasets

OmicsDI is part of the ELIXIR infrastructure

Tweets